Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 BX284613.1-201ENST00000452221 1641 ntBASIC6.37□□□□□ -1.39
O00370 LYARP1-201ENST00000436977 1501 ntBASIC6.37□□□□□ -1.39
O00370 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
O00370 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 KYNUP3-201ENST00000574386 1341 ntBASIC6.37□□□□□ -1.39
O00370 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
O00370 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.37□□□□□ -1.39
O00370 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.37□□□□□ -1.39
O00370 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.37□□□□□ -1.39
O00370 RN7SL269P-201ENST00000467795 305 ntBASIC6.37□□□□□ -1.39
O00370 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.37□□□□□ -1.39
O00370 AC093719.1-201ENST00000480427 441 ntBASIC6.37□□□□□ -1.39
O00370 CR383656.1-201ENST00000484916 377 ntBASIC6.37□□□□□ -1.39
O00370 AC124945.1-201ENST00000485133 188 ntBASIC6.37□□□□□ -1.39
O00370 AC083795.1-201ENST00000491760 320 ntBASIC6.37□□□□□ -1.39
O00370 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.37□□□□□ -1.39
O00370 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.37□□□□□ -1.39
O00370 RNA5SP340-201ENST00000517132 107 ntBASIC6.37□□□□□ -1.39
O00370 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 AC110056.1-201ENST00000525759 911 ntBASIC6.37□□□□□ -1.39
O00370 EIF4EP5-201ENST00000528228 640 ntBASIC6.37□□□□□ -1.39
O00370 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.37□□□□□ -1.39
O00370 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.37□□□□□ -1.39
O00370 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.37□□□□□ -1.39
O00370 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.37□□□□□ -1.39
O00370 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 AC008507.3-201ENST00000585753 472 ntBASIC6.37□□□□□ -1.39
O00370 AC025857.2-201ENST00000602711 238 ntBASIC6.37□□□□□ -1.39
O00370 AL136097.3-201ENST00000611097 505 ntBASIC6.37□□□□□ -1.39
O00370 MIR6809-201ENST00000612189 116 ntBASIC6.37□□□□□ -1.39
O00370 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 uc_338.26-201ENST00000612659 160 ntBASIC6.37□□□□□ -1.39
O00370 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.37□□□□□ -1.39
O00370 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
O00370 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
O00370 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.37□□□□□ -1.39
O00370 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.37□□□□□ -1.39
O00370 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
O00370 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
O00370 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 RBPJP7-201ENST00000442803 1447 ntBASIC6.36□□□□□ -1.39
O00370 RBPJP5-201ENST00000449433 1447 ntBASIC6.36□□□□□ -1.39
O00370 AL731532.1-201ENST00000623972 4236 ntBASIC6.36□□□□□ -1.39
O00370 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
O00370 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 OR56A4-201ENST00000330728 1209 ntBASIC6.36□□□□□ -1.39
O00370 AL050305.1-201ENST00000399993 1230 ntBASIC6.36□□□□□ -1.39
O00370 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
O00370 MYL6P5-201ENST00000412707 459 ntBASIC6.36□□□□□ -1.39
O00370 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.36□□□□□ -1.39
O00370 AL354868.1-201ENST00000417077 482 ntBASIC6.36□□□□□ -1.39
O00370 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.36□□□□□ -1.39
O00370 GAPDHP34-201ENST00000432112 823 ntBASIC6.36□□□□□ -1.39
O00370 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.36□□□□□ -1.39
O00370 GAPDHP75-201ENST00000433910 943 ntBASIC6.36□□□□□ -1.39
O00370 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.36□□□□□ -1.39
O00370 CFL1P4-201ENST00000451536 498 ntBASIC6.36□□□□□ -1.39
O00370 AC104164.1-201ENST00000460282 590 ntBASIC6.36□□□□□ -1.39
O00370 AC108751.3-201ENST00000461814 1020 ntBASIC6.36□□□□□ -1.39
O00370 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 AC023194.2-201ENST00000465398 406 ntBASIC6.36□□□□□ -1.39
O00370 AC098847.1-201ENST00000473094 348 ntBASIC6.36□□□□□ -1.39
O00370 AC092865.4-201ENST00000477936 615 ntBASIC6.36□□□□□ -1.39
O00370 LSM3P4-201ENST00000502948 309 ntBASIC6.36□□□□□ -1.39
O00370 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.36□□□□□ -1.39
O00370 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.36□□□□□ -1.39
O00370 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 RPA2P1-201ENST00000556557 721 ntBASIC6.36□□□□□ -1.39
O00370 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.36□□□□□ -1.39
O00370 NPM1P42-201ENST00000560329 862 ntBASIC6.36□□□□□ -1.39
O00370 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.36□□□□□ -1.39
O00370 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.36□□□□□ -1.39
O00370 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.36□□□□□ -1.39
O00370 AP001357.1-201ENST00000586304 1053 ntBASIC6.36□□□□□ -1.39
O00370 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
O00370 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
O00370 AC096708.4-201ENST00000620563 552 ntBASIC6.36□□□□□ -1.39
O00370 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.36□□□□□ -1.39
O00370 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
O00370 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms