Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC022034.1-201ENST00000512867 2156 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 SNORA70.20-201ENST00000516848 126 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 TTC41P-205ENST00000551270 3963 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC135626.1-201ENST00000556983 435 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC119403.2-201ENST00000590960 598 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC137695.1-201ENST00000604126 489 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AL034374.2-201ENST00000605281 548 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 RPL12P48-201ENST00000605620 304 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC005899.7-201ENST00000618199 588 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC009831.5-201ENST00000624000 3189 ntBASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD8-MDP1E9PL57 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 MIR375-201ENST00000362103 64 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 RNA5SP500-201ENST00000364486 119 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 RN7SKP286-201ENST00000410894 299 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 PTCD2P2-201ENST00000415579 1095 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 RN7SL273P-201ENST00000481561 299 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC009237.12-201ENST00000604755 742 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 AC016583.1-201ENST00000624221 2431 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 NCOA4P2-201ENST00000340589 1813 ntBASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD8-MDP1E9PL57 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 SNORA51.1-201ENST00000363243 140 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 RNA5SP242-201ENST00000364171 118 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 OR7E101P-201ENST00000400428 513 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 RPL7P58-201ENST00000402913 758 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AL353626.3-201ENST00000413399 657 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC007562.1-201ENST00000421819 517 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC007568.1-201ENST00000422912 471 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC064862.4-201ENST00000442180 334 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC079922.1-201ENST00000443291 359 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC023274.2-201ENST00000445264 521 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC124945.1-201ENST00000485133 188 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 CCDC11P1-201ENST00000503137 1162 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 GAPDHP71-201ENST00000511530 1003 ntBASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
NEDD8-MDP1E9PL57 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 539.2 ms