Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA2Q9Y261 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
FOXA2Q9Y261 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 HLA-G-202ENST00000376815 851 ntBASIC15.91■□□□□ 0.14
FOXA2Q9Y261 HLA-G-203ENST00000376818 1127 ntBASIC15.91■□□□□ 0.14
FOXA2Q9Y261 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.91■□□□□ 0.14
FOXA2Q9Y261 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 AL138781.1-201ENST00000566567 1274 ntBASIC15.91■□□□□ 0.14
FOXA2Q9Y261 AC142086.2-201ENST00000569753 217 ntBASIC15.91■□□□□ 0.14
FOXA2Q9Y261 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 AC133041.1-202ENST00000642053 222 ntBASIC15.91■□□□□ 0.14
FOXA2Q9Y261 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXA2Q9Y261 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXA2Q9Y261 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms