Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 KRT17P6-201ENST00000453795 1220 ntBASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 RN7SL510P-201ENST00000581311 263 ntBASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 AC140113.3-201ENST00000605663 199 ntBASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 CR769767.2-201ENST00000622735 460 ntBASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3H4Q9UPT8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.95■■□□□ 1.43
ZC3H4Q9UPT8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.95■■□□□ 1.43
ZC3H4Q9UPT8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
ZC3H4Q9UPT8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 AL353719.1-201ENST00000566847 864 ntBASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.95■■□□□ 1.42
ZC3H4Q9UPT8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 FAAHP1-202ENST00000446499 1238 ntBASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 AC008040.2-201ENST00000461049 708 ntBASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3H4Q9UPT8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 TSPY21P-201ENST00000433481 731 ntBASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 AP000347.1-202ENST00000435868 847 ntBASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 TSPY23P-201ENST00000440136 739 ntBASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 AC111152.3-201ENST00000569699 673 ntBASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 AL023973.1-201ENST00000624619 620 ntBASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.93■■□□□ 1.42
ZC3H4Q9UPT8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC004870.1-201ENST00000315132 882 ntBASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 TUBB8P6-201ENST00000436895 1288 ntBASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 KRT18P38-201ENST00000449496 1282 ntBASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 ZNF444P1-201ENST00000559497 298 ntBASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC083849.1-201ENST00000615227 514 ntBASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 AC004263.2-201ENST00000617183 678 ntBASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3H4Q9UPT8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 CA15P1-201ENST00000481698 905 ntBASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.91■■□□□ 1.42
ZC3H4Q9UPT8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms