Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX1Q9NZR4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX1Q9NZR4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
VSX1Q9NZR4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX1Q9NZR4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VSX1Q9NZR4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX1Q9NZR4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.58■□□□□ 0.41
VSX1Q9NZR4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VSX1Q9NZR4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.58■□□□□ 0.41
VSX1Q9NZR4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
VSX1Q9NZR4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.58■□□□□ 0.41
VSX1Q9NZR4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX1Q9NZR4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.58■□□□□ 0.4
VSX1Q9NZR4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX1Q9NZR4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 AL121832.2-201ENST00000610979 668 ntBASIC17.57■□□□□ 0.4
VSX1Q9NZR4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 AC093484.2-201ENST00000580996 2166 ntBASIC17.57■□□□□ 0.4
VSX1Q9NZR4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 AC005332.7-201ENST00000614046 2005 ntBASIC17.57■□□□□ 0.4
VSX1Q9NZR4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX1Q9NZR4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 MIPEPP3-201ENST00000412105 444 ntBASIC17.56■□□□□ 0.4
VSX1Q9NZR4 AC073210.2-201ENST00000430369 194 ntBASIC17.56■□□□□ 0.4
VSX1Q9NZR4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VSX1Q9NZR4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 AC116351.2-201ENST00000606540 1585 ntBASIC17.55■□□□□ 0.4
VSX1Q9NZR4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX1Q9NZR4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms