Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 TSPY17P-201ENST00000450329 467 ntBASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 TMEM179-206ENST00000616017 1645 ntBASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 AC007225.1-201ENST00000566331 1836 ntBASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 CD70-202ENST00000423145 881 ntTSL 2 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 AC009947.2-201ENST00000444014 672 ntBASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC52A1Q9NWF4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 GXYLT1P6-201ENST00000456472 1187 ntBASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 AL353719.1-201ENST00000566847 864 ntBASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 AC011558.1-201ENST00000623459 338 ntBASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 AL121956.5-201ENST00000625261 221 ntBASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC28.36■■■□□ 2.13
SLC52A1Q9NWF4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 BID-203ENST00000399765 1879 ntTSL 2 BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC52A1Q9NWF4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 AL031432.5-201ENST00000641059 760 ntBASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 AC092720.2-201ENST00000602388 1665 ntBASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SLC52A1Q9NWF4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 AC092647.4-201ENST00000457211 535 ntBASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 CA15P1-201ENST00000481698 905 ntBASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 FAM86EP-206ENST00000510506 987 ntBASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 AL512604.3-201ENST00000569583 964 ntBASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC28.33■■■□□ 2.13
SLC52A1Q9NWF4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC28.33■■■□□ 2.12
SLC52A1Q9NWF4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC52A1Q9NWF4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms