Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR1BQ9H9Y6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 AP005212.1-201ENST00000581547 1997 ntBASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 AL390719.1-204ENST00000412397 1219 ntBASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 PRKY-204ENST00000533551 1019 ntBASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 AC006557.6-201ENST00000623071 864 ntBASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1BQ9H9Y6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 AC097493.4-201ENST00000641197 219 ntBASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR1BQ9H9Y6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 TSPY15P-201ENST00000457163 923 ntBASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
POLR1BQ9H9Y6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms