Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC011506.1-201ENST00000474329 610 ntBASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 AC012313.10-201ENST00000623509 926 ntBASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 AC246785.2-201ENST00000432512 513 ntBASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 SLC25A1P4-201ENST00000567977 778 ntBASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 AC011558.1-201ENST00000623459 338 ntBASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 AC116562.4-202ENST00000641738 218 ntBASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UBE2OQ9C0C9 PKD1P6-201ENST00000343738 4769 ntBASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 AL445675.2-201ENST00000620291 557 ntBASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.74■■□□□ 1.07
UBE2OQ9C0C9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 AL671277.2-201ENST00000458060 996 ntBASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 AC116407.4-201ENST00000623319 1061 ntBASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 AC005332.1-201ENST00000577698 1310 ntBASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UBE2OQ9C0C9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 HOMER2P1-201ENST00000455653 964 ntBASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE2OQ9C0C9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 AC244015.2-201ENST00000616358 1861 ntBASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms