Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NDNQ99608 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.73■□□□□ 0.75
NDNQ99608 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.73■□□□□ 0.75
NDNQ99608 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NDNQ99608 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.73■□□□□ 0.75
NDNQ99608 TREX1-205ENST00000625293 1783 ntBASIC19.72■□□□□ 0.75
NDNQ99608 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.72■□□□□ 0.75
NDNQ99608 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
NDNQ99608 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.72■□□□□ 0.75
NDNQ99608 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.72■□□□□ 0.75
NDNQ99608 AC006970.2-201ENST00000450065 779 ntBASIC19.72■□□□□ 0.75
NDNQ99608 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.72■□□□□ 0.75
NDNQ99608 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NDNQ99608 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDNQ99608 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NDNQ99608 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
NDNQ99608 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NDNQ99608 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 GPX1P1-201ENST00000388829 606 ntBASIC19.71■□□□□ 0.75
NDNQ99608 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.71■□□□□ 0.75
NDNQ99608 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.71■□□□□ 0.75
NDNQ99608 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.71■□□□□ 0.75
NDNQ99608 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.71■□□□□ 0.75
NDNQ99608 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NDNQ99608 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NDNQ99608 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.71■□□□□ 0.75
NDNQ99608 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.75
NDNQ99608 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDNQ99608 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 AC009237.14-201ENST00000609975 1594 ntBASIC19.7■□□□□ 0.74
NDNQ99608 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NDNQ99608 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.7■□□□□ 0.74
NDNQ99608 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.7■□□□□ 0.74
NDNQ99608 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.7■□□□□ 0.74
NDNQ99608 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.7■□□□□ 0.74
NDNQ99608 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.7■□□□□ 0.74
NDNQ99608 AC023632.3-201ENST00000521633 145 ntBASIC19.7■□□□□ 0.74
NDNQ99608 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDNQ99608 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.7■□□□□ 0.74
NDNQ99608 BX323043.1-201ENST00000641006 1765 ntBASIC19.7■□□□□ 0.74
NDNQ99608 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NDNQ99608 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
NDNQ99608 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms