Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 AC008687.6-201ENST00000596318 630 ntBASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG4P5Q96PW8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 RNA5SP413-201ENST00000516373 109 ntBASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CSPG4P5Q96PW8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CSPG4P5Q96PW8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 AL121906.2-201ENST00000621597 723 ntBASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG4P5Q96PW8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 AC008403.3-201ENST00000598924 454 ntBASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG4P5Q96PW8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG4P5Q96PW8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG4P5Q96PW8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.3■□□□□ 0.84
CSPG4P5Q96PW8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG4P5Q96PW8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms