Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 AC083880.1-201ENST00000608266 535 ntBASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 AC006557.6-201ENST00000623071 864 ntBASIC20.77■□□□□ 0.92
VCPIP1Q96JH7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.77■□□□□ 0.91
VCPIP1Q96JH7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
VCPIP1Q96JH7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 AC069152.1-201ENST00000438030 544 ntBASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 PNMA6B-201ENST00000538162 1200 ntBASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCPIP1Q96JH7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 RPS2P52-201ENST00000469610 820 ntBASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCPIP1Q96JH7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 TSPY20P-201ENST00000450910 630 ntBASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 AC098934.4-201ENST00000564127 592 ntBASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
VCPIP1Q96JH7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms