Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 AP002982.1-201ENST00000492365 877 ntBASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 AL353708.3-201ENST00000610272 989 ntBASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 AC012306.2-201ENST00000609350 630 ntBASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0A1Q93050 AC092667.1-201ENST00000434301 2586 ntBASIC22.08■■□□□ 1.12
ATP6V0A1Q93050 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATP6V0A1Q93050 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 AC010331.1-201ENST00000611423 582 ntBASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.07■■□□□ 1.12
ATP6V0A1Q93050 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 MMP23A-201ENST00000234610 1017 ntBASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A1Q93050 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 YBX1P10-201ENST00000444752 975 ntBASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A1Q93050 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 AP001271.2-201ENST00000624018 1556 ntBASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 LINC01006-201ENST00000333319 2292 ntBASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms