Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 AC073912.3-201ENST00000624414 853 ntBASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC60Q8IWA6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.95■■□□□ 1.11
CCDC60Q8IWA6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
CCDC60Q8IWA6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 TMEM179-206ENST00000616017 1645 ntBASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 TUBB8P6-201ENST00000436895 1288 ntBASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 AP001271.2-201ENST00000624018 1556 ntBASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC60Q8IWA6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 AL355355.2-201ENST00000442321 338 ntBASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 KSR1P1-201ENST00000446298 240 ntBASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 CR392000.1-201ENST00000624770 1228 ntBASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC60Q8IWA6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 NUDT16P1-203ENST00000513809 620 ntBASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC60Q8IWA6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms