Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 TSPY12P-201ENST00000421279 868 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 KRT18P31-201ENST00000506277 1292 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 AC016734.2-201ENST00000624325 1377 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RIF1Q5UIP0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 CA15P1-201ENST00000481698 905 ntBASIC19.23■□□□□ 0.67
RIF1Q5UIP0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.23■□□□□ 0.67
RIF1Q5UIP0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 SPDYE15P-201ENST00000424157 909 ntBASIC19.22■□□□□ 0.67
RIF1Q5UIP0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 AL645929.1-201ENST00000420084 975 ntBASIC19.22■□□□□ 0.67
RIF1Q5UIP0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 RNA5SP419-201ENST00000515908 135 ntBASIC19.22■□□□□ 0.67
RIF1Q5UIP0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RIF1Q5UIP0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 AL590627.1-203ENST00000421194 1026 ntBASIC19.21■□□□□ 0.67
RIF1Q5UIP0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 FAM99A-202ENST00000538190 1989 ntBASIC19.21■□□□□ 0.67
RIF1Q5UIP0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.21■□□□□ 0.67
RIF1Q5UIP0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.66
RIF1Q5UIP0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 KRT16P4-201ENST00000453883 522 ntBASIC19.2■□□□□ 0.66
RIF1Q5UIP0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms