Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 AC034268.1-201ENST00000441047 882 ntBASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 CNN2P6-201ENST00000439038 900 ntBASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 CYP2T3P-201ENST00000601990 817 ntBASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RUNDC3AQ59EK9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 DUX4L16-201ENST00000555130 1264 ntBASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RUNDC3AQ59EK9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RUNDC3AQ59EK9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 AC023632.3-201ENST00000521633 145 ntBASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RUNDC3AQ59EK9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms