Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.61■□□□□ 0.41
CLRN1P58418 AC133041.1-202ENST00000642053 222 ntBASIC17.61■□□□□ 0.41
CLRN1P58418 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLRN1P58418 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLRN1P58418 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLRN1P58418 AC092368.3-202ENST00000574180 1591 ntBASIC17.61■□□□□ 0.41
CLRN1P58418 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLRN1P58418 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLRN1P58418 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLRN1P58418 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.61■□□□□ 0.41
CLRN1P58418 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLRN1P58418 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CLRN1P58418 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.61■□□□□ 0.41
CLRN1P58418 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLRN1P58418 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLRN1P58418 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLRN1P58418 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.6■□□□□ 0.41
CLRN1P58418 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLRN1P58418 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLRN1P58418 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.6■□□□□ 0.41
CLRN1P58418 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.6■□□□□ 0.41
CLRN1P58418 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 AC098934.4-201ENST00000564127 592 ntBASIC17.6■□□□□ 0.41
CLRN1P58418 MYC-209ENST00000641252 345 ntBASIC17.6■□□□□ 0.41
CLRN1P58418 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLRN1P58418 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.6■□□□□ 0.41
CLRN1P58418 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.6■□□□□ 0.41
CLRN1P58418 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLRN1P58418 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
CLRN1P58418 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
CLRN1P58418 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.6■□□□□ 0.41
CLRN1P58418 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLRN1P58418 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLRN1P58418 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
CLRN1P58418 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.59■□□□□ 0.41
CLRN1P58418 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 AC069152.1-201ENST00000438030 544 ntBASIC17.59■□□□□ 0.41
CLRN1P58418 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.59■□□□□ 0.41
CLRN1P58418 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 AC006557.6-201ENST00000623071 864 ntBASIC17.59■□□□□ 0.41
CLRN1P58418 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLRN1P58418 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLRN1P58418 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLRN1P58418 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.59■□□□□ 0.41
CLRN1P58418 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CLRN1P58418 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLRN1P58418 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLRN1P58418 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLRN1P58418 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLRN1P58418 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.58■□□□□ 0.41
CLRN1P58418 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CLRN1P58418 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLRN1P58418 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLRN1P58418 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.58■□□□□ 0.4
CLRN1P58418 AL355802.2-201ENST00000402069 882 ntBASIC17.58■□□□□ 0.4
CLRN1P58418 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 AC073210.2-201ENST00000430369 194 ntBASIC17.58■□□□□ 0.4
CLRN1P58418 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLRN1P58418 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.58■□□□□ 0.4
CLRN1P58418 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.58■□□□□ 0.4
CLRN1P58418 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.58■□□□□ 0.4
CLRN1P58418 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.58■□□□□ 0.4
CLRN1P58418 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.58■□□□□ 0.4
CLRN1P58418 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLRN1P58418 HLA-B-256ENST00000639848 1089 ntBASIC17.58■□□□□ 0.4
CLRN1P58418 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.58■□□□□ 0.4
CLRN1P58418 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLRN1P58418 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLRN1P58418 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLRN1P58418 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms