Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATXN1P54253 AC087499.1-201ENST00000418141 1075 ntBASIC20.72■□□□□ 0.91
ATXN1P54253 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.72■□□□□ 0.91
ATXN1P54253 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ATXN1P54253 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATXN1P54253 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.72■□□□□ 0.91
ATXN1P54253 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.72■□□□□ 0.91
ATXN1P54253 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATXN1P54253 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN1P54253 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN1P54253 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATXN1P54253 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 TSPY7P-201ENST00000431358 1114 ntBASIC20.71■□□□□ 0.91
ATXN1P54253 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.71■□□□□ 0.91
ATXN1P54253 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ATXN1P54253 AC097493.4-201ENST00000641197 219 ntBASIC20.71■□□□□ 0.91
ATXN1P54253 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN1P54253 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN1P54253 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN1P54253 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN1P54253 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ATXN1P54253 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN1P54253 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.7■□□□□ 0.9
ATXN1P54253 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.7■□□□□ 0.9
ATXN1P54253 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATXN1P54253 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.7■□□□□ 0.9
ATXN1P54253 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATXN1P54253 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.7■□□□□ 0.9
ATXN1P54253 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ATXN1P54253 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN1P54253 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN1P54253 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN1P54253 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.69■□□□□ 0.9
ATXN1P54253 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN1P54253 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN1P54253 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN1P54253 AC012306.2-201ENST00000609350 630 ntBASIC20.69■□□□□ 0.9
ATXN1P54253 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN1P54253 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN1P54253 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN1P54253 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN1P54253 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.69■□□□□ 0.9
ATXN1P54253 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.68■□□□□ 0.9
ATXN1P54253 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN1P54253 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN1P54253 AC125437.2-201ENST00000625180 2167 ntBASIC20.68■□□□□ 0.9
ATXN1P54253 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN1P54253 TMPOP1-202ENST00000424642 1267 ntBASIC20.68■□□□□ 0.9
ATXN1P54253 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN1P54253 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ATXN1P54253 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.68■□□□□ 0.9
ATXN1P54253 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.68■□□□□ 0.9
ATXN1P54253 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN1P54253 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN1P54253 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN1P54253 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN1P54253 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN1P54253 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATXN1P54253 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ATXN1P54253 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms