Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF140P52738 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF140P52738 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF140P52738 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF140P52738 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF140P52738 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF140P52738 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF140P52738 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZNF140P52738 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF140P52738 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
ZNF140P52738 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF140P52738 CD99P1-205ENST00000527459 561 ntBASIC19.65■□□□□ 0.74
ZNF140P52738 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF140P52738 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF140P52738 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF140P52738 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZNF140P52738 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZNF140P52738 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF140P52738 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF140P52738 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF140P52738 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF140P52738 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ZNF140P52738 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF140P52738 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF140P52738 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF140P52738 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
ZNF140P52738 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF140P52738 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF140P52738 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF140P52738 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF140P52738 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF140P52738 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF140P52738 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF140P52738 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF140P52738 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF140P52738 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF140P52738 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF140P52738 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF140P52738 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF140P52738 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF140P52738 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF140P52738 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF140P52738 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ZNF140P52738 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF140P52738 ESRRAP1-201ENST00000400596 1257 ntBASIC19.63■□□□□ 0.73
ZNF140P52738 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF140P52738 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF140P52738 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF140P52738 AC233263.1-201ENST00000578059 224 ntBASIC19.63■□□□□ 0.73
ZNF140P52738 MIR4651-201ENST00000582622 73 ntBASIC19.63■□□□□ 0.73
ZNF140P52738 AC069544.1-201ENST00000609399 999 ntBASIC19.63■□□□□ 0.73
ZNF140P52738 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF140P52738 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF140P52738 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF140P52738 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZNF140P52738 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF140P52738 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF140P52738 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF140P52738 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF140P52738 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF140P52738 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF140P52738 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZNF140P52738 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF140P52738 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF140P52738 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF140P52738 AP006587.1-201ENST00000534129 1502 ntBASIC19.61■□□□□ 0.73
ZNF140P52738 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF140P52738 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ZNF140P52738 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF140P52738 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF140P52738 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF140P52738 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms