Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RNF144AP50876 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF144AP50876 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF144AP50876 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF144AP50876 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 HLA-G-202ENST00000376815 851 ntBASIC18.29■□□□□ 0.52
RNF144AP50876 HLA-G-203ENST00000376818 1127 ntBASIC18.29■□□□□ 0.52
RNF144AP50876 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF144AP50876 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF144AP50876 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF144AP50876 KRT16P6-202ENST00000425692 1426 ntBASIC18.29■□□□□ 0.52
RNF144AP50876 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF144AP50876 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF144AP50876 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF144AP50876 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF144AP50876 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF144AP50876 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 ID1-201ENST00000376105 1233 ntBASIC18.28■□□□□ 0.52
RNF144AP50876 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF144AP50876 AC097658.1-201ENST00000475555 843 ntBASIC18.28■□□□□ 0.52
RNF144AP50876 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
RNF144AP50876 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF144AP50876 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF144AP50876 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF144AP50876 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF144AP50876 MYC-209ENST00000641252 345 ntBASIC18.28■□□□□ 0.52
RNF144AP50876 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RNF144AP50876 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF144AP50876 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RNF144AP50876 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF144AP50876 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF144AP50876 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF144AP50876 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF144AP50876 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF144AP50876 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF144AP50876 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF144AP50876 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF144AP50876 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF144AP50876 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF144AP50876 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 AC069152.1-201ENST00000438030 544 ntBASIC18.27■□□□□ 0.52
RNF144AP50876 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RNF144AP50876 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF144AP50876 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF144AP50876 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF144AP50876 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RNF144AP50876 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF144AP50876 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.27■□□□□ 0.51
RNF144AP50876 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF144AP50876 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF144AP50876 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 AC092368.3-202ENST00000574180 1591 ntBASIC18.26■□□□□ 0.51
RNF144AP50876 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF144AP50876 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF144AP50876 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF144AP50876 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF144AP50876 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF144AP50876 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms