Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PRIM2P49643 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.72■□□□□ 0.59
PRIM2P49643 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.72■□□□□ 0.59
PRIM2P49643 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 MIR663A-201ENST00000385250 93 ntBASIC18.72■□□□□ 0.59
PRIM2P49643 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 AF201337.1-201ENST00000520239 748 ntBASIC18.72■□□□□ 0.59
PRIM2P49643 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.72■□□□□ 0.59
PRIM2P49643 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.72■□□□□ 0.59
PRIM2P49643 RAP2CP1-201ENST00000605103 478 ntBASIC18.72■□□□□ 0.59
PRIM2P49643 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.72■□□□□ 0.59
PRIM2P49643 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRIM2P49643 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRIM2P49643 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRIM2P49643 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PRIM2P49643 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRIM2P49643 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
PRIM2P49643 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRIM2P49643 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRIM2P49643 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PRIM2P49643 LSM12P1-201ENST00000411836 588 ntBASIC18.71■□□□□ 0.59
PRIM2P49643 AC105036.2-201ENST00000569468 176 ntBASIC18.71■□□□□ 0.59
PRIM2P49643 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.71■□□□□ 0.59
PRIM2P49643 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PRIM2P49643 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
PRIM2P49643 MKRN4P-201ENST00000444706 1521 ntBASIC18.7■□□□□ 0.58
PRIM2P49643 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.7■□□□□ 0.58
PRIM2P49643 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PRIM2P49643 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.7■□□□□ 0.58
PRIM2P49643 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.7■□□□□ 0.58
PRIM2P49643 AC087289.5-201ENST00000586076 3175 ntBASIC18.7■□□□□ 0.58
PRIM2P49643 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.7■□□□□ 0.58
PRIM2P49643 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.7■□□□□ 0.58
PRIM2P49643 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRIM2P49643 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
PRIM2P49643 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PRIM2P49643 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.7■□□□□ 0.58
PRIM2P49643 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRIM2P49643 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 KRT17P1-201ENST00000399211 1546 ntBASIC18.69■□□□□ 0.58
PRIM2P49643 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.69■□□□□ 0.58
PRIM2P49643 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 KRT8P17-201ENST00000453110 1448 ntBASIC18.69■□□□□ 0.58
PRIM2P49643 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.69■□□□□ 0.58
PRIM2P49643 C2orf69P4-201ENST00000565394 541 ntBASIC18.69■□□□□ 0.58
PRIM2P49643 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 AL031963.3-201ENST00000606441 850 ntBASIC18.69■□□□□ 0.58
PRIM2P49643 AL050303.2-201ENST00000619798 666 ntBASIC18.69■□□□□ 0.58
PRIM2P49643 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.69■□□□□ 0.58
PRIM2P49643 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRIM2P49643 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.69■□□□□ 0.58
PRIM2P49643 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRIM2P49643 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRIM2P49643 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRIM2P49643 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 KRT8P20-201ENST00000423953 1409 ntBASIC18.68■□□□□ 0.58
PRIM2P49643 KRT16P6-202ENST00000425692 1426 ntBASIC18.68■□□□□ 0.58
PRIM2P49643 PTBP1P-201ENST00000554374 1601 ntBASIC18.68■□□□□ 0.58
PRIM2P49643 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.68■□□□□ 0.58
PRIM2P49643 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.68■□□□□ 0.58
PRIM2P49643 AC006970.2-201ENST00000450065 779 ntBASIC18.68■□□□□ 0.58
PRIM2P49643 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.68■□□□□ 0.58
PRIM2P49643 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.68■□□□□ 0.58
PRIM2P49643 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.68■□□□□ 0.58
PRIM2P49643 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PRIM2P49643 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRIM2P49643 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRIM2P49643 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms