Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
KCNA3P22001 ATP5G2P1-201ENST00000433580 426 ntBASIC24.32■■□□□ 1.48
KCNA3P22001 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.32■■□□□ 1.48
KCNA3P22001 VENTXP5-201ENST00000523979 775 ntBASIC24.32■■□□□ 1.48
KCNA3P22001 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.32■■□□□ 1.48
KCNA3P22001 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
KCNA3P22001 AC083849.1-201ENST00000615227 514 ntBASIC24.32■■□□□ 1.48
KCNA3P22001 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
KCNA3P22001 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNA3P22001 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
KCNA3P22001 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNA3P22001 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
KCNA3P22001 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.31■■□□□ 1.48
KCNA3P22001 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
KCNA3P22001 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
KCNA3P22001 Z85996.1-201ENST00000494644 937 ntBASIC24.31■■□□□ 1.48
KCNA3P22001 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.31■■□□□ 1.48
KCNA3P22001 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
KCNA3P22001 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNA3P22001 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNA3P22001 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
KCNA3P22001 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
KCNA3P22001 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.3■■□□□ 1.48
KCNA3P22001 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.3■■□□□ 1.48
KCNA3P22001 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.3■■□□□ 1.48
KCNA3P22001 AL512604.3-201ENST00000569583 964 ntBASIC24.3■■□□□ 1.48
KCNA3P22001 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNA3P22001 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNA3P22001 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.3■■□□□ 1.48
KCNA3P22001 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.29■■□□□ 1.48
KCNA3P22001 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.29■■□□□ 1.48
KCNA3P22001 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.29■■□□□ 1.48
KCNA3P22001 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.29■■□□□ 1.48
KCNA3P22001 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.29■■□□□ 1.48
KCNA3P22001 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.29■■□□□ 1.48
KCNA3P22001 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.29■■□□□ 1.48
KCNA3P22001 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.29■■□□□ 1.48
KCNA3P22001 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.29■■□□□ 1.48
KCNA3P22001 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
KCNA3P22001 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 AC121338.2-201ENST00000622535 1744 ntBASIC24.29■■□□□ 1.48
KCNA3P22001 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.29■■□□□ 1.48
KCNA3P22001 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
KCNA3P22001 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
KCNA3P22001 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
KCNA3P22001 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNA3P22001 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.28■■□□□ 1.48
KCNA3P22001 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.28■■□□□ 1.48
KCNA3P22001 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
KCNA3P22001 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.28■■□□□ 1.48
KCNA3P22001 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC24.28■■□□□ 1.48
KCNA3P22001 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
KCNA3P22001 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.28■■□□□ 1.48
KCNA3P22001 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC24.28■■□□□ 1.48
KCNA3P22001 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.28■■□□□ 1.48
KCNA3P22001 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC24.28■■□□□ 1.48
KCNA3P22001 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNA3P22001 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.28■■□□□ 1.48
KCNA3P22001 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNA3P22001 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.27■■□□□ 1.48
KCNA3P22001 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.27■■□□□ 1.48
KCNA3P22001 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.27■■□□□ 1.48
KCNA3P22001 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.27■■□□□ 1.48
KCNA3P22001 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.27■■□□□ 1.48
KCNA3P22001 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.27■■□□□ 1.48
KCNA3P22001 ZNF444P1-201ENST00000559497 298 ntBASIC24.27■■□□□ 1.48
KCNA3P22001 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
KCNA3P22001 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
KCNA3P22001 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
KCNA3P22001 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.26■■□□□ 1.47
KCNA3P22001 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
KCNA3P22001 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.26■■□□□ 1.47
KCNA3P22001 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.26■■□□□ 1.47
KCNA3P22001 NPAP1P7-201ENST00000613027 823 ntBASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms