Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 MMP23A-201ENST00000234610 1017 ntBASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 NIFKP9-201ENST00000419265 221 ntBASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 AC012306.2-201ENST00000609350 630 ntBASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40ALP0C0E4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 AP006587.1-201ENST00000534129 1502 ntBASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 AC116351.2-201ENST00000606540 1585 ntBASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40ALP0C0E4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 AC092720.2-201ENST00000602388 1665 ntBASIC18.58■□□□□ 0.57
RAB40ALP0C0E4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB40ALP0C0E4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 UNC93B2-201ENST00000285383 730 ntBASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 KRT16P1-201ENST00000399124 1418 ntBASIC18.57■□□□□ 0.56
RAB40ALP0C0E4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms