Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.8■□□□□ 0.76
VAPBO95292 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VAPBO95292 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAPBO95292 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPBO95292 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPBO95292 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAPBO95292 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 AC091874.3-201ENST00000512672 1195 ntBASIC19.8■□□□□ 0.76
VAPBO95292 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.8■□□□□ 0.76
VAPBO95292 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.8■□□□□ 0.76
VAPBO95292 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.79■□□□□ 0.76
VAPBO95292 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VAPBO95292 AL390719.1-204ENST00000412397 1219 ntBASIC19.79■□□□□ 0.76
VAPBO95292 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.79■□□□□ 0.76
VAPBO95292 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.79■□□□□ 0.76
VAPBO95292 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.79■□□□□ 0.76
VAPBO95292 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.79■□□□□ 0.76
VAPBO95292 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.79■□□□□ 0.76
VAPBO95292 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPBO95292 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPBO95292 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.79■□□□□ 0.76
VAPBO95292 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.78■□□□□ 0.76
VAPBO95292 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.78■□□□□ 0.76
VAPBO95292 MIR4758-201ENST00000577688 71 ntBASIC19.78■□□□□ 0.76
VAPBO95292 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.78■□□□□ 0.76
VAPBO95292 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VAPBO95292 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.78■□□□□ 0.76
VAPBO95292 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAPBO95292 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPBO95292 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.77■□□□□ 0.76
VAPBO95292 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.77■□□□□ 0.76
VAPBO95292 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.77■□□□□ 0.76
VAPBO95292 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
VAPBO95292 AC093484.2-201ENST00000580996 2166 ntBASIC19.77■□□□□ 0.76
VAPBO95292 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.77■□□□□ 0.76
VAPBO95292 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VAPBO95292 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.77■□□□□ 0.76
VAPBO95292 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.77■□□□□ 0.76
VAPBO95292 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
VAPBO95292 AC005829.2-201ENST00000571422 1056 ntBASIC19.77■□□□□ 0.76
VAPBO95292 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPBO95292 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.77■□□□□ 0.76
VAPBO95292 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
VAPBO95292 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
VAPBO95292 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
VAPBO95292 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms