Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GFRA3O60609 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GFRA3O60609 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.27■□□□□ 0.67
GFRA3O60609 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.26■□□□□ 0.67
GFRA3O60609 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.26■□□□□ 0.67
GFRA3O60609 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA3O60609 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.26■□□□□ 0.67
GFRA3O60609 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GFRA3O60609 RASA4DP-201ENST00000460726 1199 ntBASIC19.26■□□□□ 0.67
GFRA3O60609 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.26■□□□□ 0.67
GFRA3O60609 AP003041.3-201ENST00000527151 707 ntBASIC19.26■□□□□ 0.67
GFRA3O60609 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.26■□□□□ 0.67
GFRA3O60609 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.26■□□□□ 0.67
GFRA3O60609 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.26■□□□□ 0.67
GFRA3O60609 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.26■□□□□ 0.67
GFRA3O60609 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA3O60609 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA3O60609 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA3O60609 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA3O60609 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
GFRA3O60609 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA3O60609 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA3O60609 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 HBZP1-201ENST00000354915 429 ntBASIC19.25■□□□□ 0.67
GFRA3O60609 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 BX842568.4-201ENST00000421222 227 ntBASIC19.25■□□□□ 0.67
GFRA3O60609 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.25■□□□□ 0.67
GFRA3O60609 TUBB8P6-201ENST00000436895 1288 ntBASIC19.25■□□□□ 0.67
GFRA3O60609 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.25■□□□□ 0.67
GFRA3O60609 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.25■□□□□ 0.67
GFRA3O60609 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA3O60609 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.25■□□□□ 0.67
GFRA3O60609 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.25■□□□□ 0.67
GFRA3O60609 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA3O60609 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA3O60609 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GFRA3O60609 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.25■□□□□ 0.67
GFRA3O60609 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
GFRA3O60609 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA3O60609 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.24■□□□□ 0.67
GFRA3O60609 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GFRA3O60609 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.24■□□□□ 0.67
GFRA3O60609 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.24■□□□□ 0.67
GFRA3O60609 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.24■□□□□ 0.67
GFRA3O60609 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 CA15P1-201ENST00000481698 905 ntBASIC19.24■□□□□ 0.67
GFRA3O60609 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.24■□□□□ 0.67
GFRA3O60609 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.24■□□□□ 0.67
GFRA3O60609 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.24■□□□□ 0.67
GFRA3O60609 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA3O60609 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GFRA3O60609 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.24■□□□□ 0.67
GFRA3O60609 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.23■□□□□ 0.67
GFRA3O60609 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.23■□□□□ 0.67
GFRA3O60609 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GFRA3O60609 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.23■□□□□ 0.67
GFRA3O60609 TSPY12P-201ENST00000421279 868 ntBASIC19.23■□□□□ 0.67
GFRA3O60609 PMS2P2-201ENST00000425039 1128 ntBASIC19.23■□□□□ 0.67
GFRA3O60609 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 KRT18P31-201ENST00000506277 1292 ntBASIC19.23■□□□□ 0.67
GFRA3O60609 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA3O60609 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.23■□□□□ 0.67
GFRA3O60609 NEK4P2-201ENST00000580004 1012 ntBASIC19.23■□□□□ 0.67
GFRA3O60609 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.23■□□□□ 0.67
GFRA3O60609 AC079416.2-201ENST00000625035 1193 ntBASIC19.23■□□□□ 0.67
GFRA3O60609 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.23■□□□□ 0.67
GFRA3O60609 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GFRA3O60609 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.23■□□□□ 0.67
GFRA3O60609 IL9RP2-201ENST00000423948 1312 ntBASIC19.23■□□□□ 0.67
GFRA3O60609 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.22■□□□□ 0.67
GFRA3O60609 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.22■□□□□ 0.67
GFRA3O60609 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.22■□□□□ 0.67
GFRA3O60609 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.22■□□□□ 0.67
GFRA3O60609 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.22■□□□□ 0.67
GFRA3O60609 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 AC244107.1-201ENST00000442033 332 ntBASIC19.22■□□□□ 0.67
GFRA3O60609 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.22■□□□□ 0.67
GFRA3O60609 FOSL1P1-201ENST00000511041 816 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms