Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
NPHP1O15259 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPHP1O15259 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.84■■□□□ 1.57
NPHP1O15259 ECEL1P2-202ENST00000465689 757 ntBASIC24.84■■□□□ 1.57
NPHP1O15259 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPHP1O15259 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.84■■□□□ 1.57
NPHP1O15259 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.84■■□□□ 1.57
NPHP1O15259 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPHP1O15259 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPHP1O15259 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.83■■□□□ 1.57
NPHP1O15259 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NPHP1O15259 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
NPHP1O15259 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NPHP1O15259 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.83■■□□□ 1.57
NPHP1O15259 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.83■■□□□ 1.57
NPHP1O15259 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.57
NPHP1O15259 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.83■■□□□ 1.57
NPHP1O15259 AC026271.3-201ENST00000571884 352 ntBASIC24.83■■□□□ 1.57
NPHP1O15259 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
NPHP1O15259 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
NPHP1O15259 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.83■■□□□ 1.57
NPHP1O15259 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.83■■□□□ 1.57
NPHP1O15259 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
NPHP1O15259 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
NPHP1O15259 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
NPHP1O15259 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
NPHP1O15259 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.83■■□□□ 1.56
NPHP1O15259 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
NPHP1O15259 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NPHP1O15259 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.82■■□□□ 1.56
NPHP1O15259 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NPHP1O15259 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPHP1O15259 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPHP1O15259 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
NPHP1O15259 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPHP1O15259 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPHP1O15259 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NPHP1O15259 AC128688.1-201ENST00000487626 519 ntBASIC24.82■■□□□ 1.56
NPHP1O15259 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NPHP1O15259 AC097488.1-201ENST00000507834 756 ntBASIC24.82■■□□□ 1.56
NPHP1O15259 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.82■■□□□ 1.56
NPHP1O15259 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.82■■□□□ 1.56
NPHP1O15259 AL445675.2-201ENST00000620291 557 ntBASIC24.82■■□□□ 1.56
NPHP1O15259 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPHP1O15259 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
NPHP1O15259 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 FP700111.2-201ENST00000619190 1892 ntBASIC24.81■■□□□ 1.56
NPHP1O15259 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.81■■□□□ 1.56
NPHP1O15259 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
NPHP1O15259 WWOX-216ENST00000569818 525 ntBASIC24.81■■□□□ 1.56
NPHP1O15259 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
NPHP1O15259 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
NPHP1O15259 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHP1O15259 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.8■■□□□ 1.56
NPHP1O15259 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 B3GAT3P1-201ENST00000471720 806 ntBASIC24.8■■□□□ 1.56
NPHP1O15259 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
NPHP1O15259 EGLN1P1-201ENST00000531623 762 ntBASIC24.8■■□□□ 1.56
NPHP1O15259 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.8■■□□□ 1.56
NPHP1O15259 DGCR10-201ENST00000609839 495 ntBASIC24.8■■□□□ 1.56
NPHP1O15259 AC131212.4-201ENST00000623606 975 ntBASIC24.8■■□□□ 1.56
NPHP1O15259 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.8■■□□□ 1.56
NPHP1O15259 DPP3P2-201ENST00000416030 1696 ntBASIC24.8■■□□□ 1.56
NPHP1O15259 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NPHP1O15259 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NPHP1O15259 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NPHP1O15259 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPHP1O15259 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
NPHP1O15259 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
NPHP1O15259 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPHP1O15259 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPHP1O15259 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.79■■□□□ 1.56
NPHP1O15259 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.79■■□□□ 1.56
NPHP1O15259 TUBB8P6-201ENST00000436895 1288 ntBASIC24.79■■□□□ 1.56
NPHP1O15259 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NPHP1O15259 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.79■■□□□ 1.56
NPHP1O15259 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NPHP1O15259 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPHP1O15259 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.79■■□□□ 1.56
NPHP1O15259 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.79■■□□□ 1.56
NPHP1O15259 KRT16P6-202ENST00000425692 1426 ntBASIC24.78■■□□□ 1.56
NPHP1O15259 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.78■■□□□ 1.56
NPHP1O15259 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPHP1O15259 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
NPHP1O15259 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 397.5 ms