Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AP001264.1-201ENST00000620602 703 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AL122023.1-201ENST00000622847 530 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC012254.5-201ENST00000623573 478 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC025262.3-201ENST00000623666 360 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC093875.1-201ENST00000623688 504 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC090617.9-201ENST00000623751 147 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AP001052.1-201ENST00000626421 99 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 OR52B5P-204ENST00000641744 3467 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC073342.2-201ENST00000595842 1800 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC005618.1-201ENST00000606901 3148 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 YWHAZP4-201ENST00000392459 708 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 VN1R20P-201ENST00000425215 966 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 MTCYBP15-201ENST00000433123 1127 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC242426.1-201ENST00000435270 960 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 GTF2IP14-201ENST00000441415 586 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RNFT1P2-201ENST00000443064 757 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RPL23AP23-201ENST00000452590 471 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RAB28P2-201ENST00000454299 641 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RPS3AP53-201ENST00000454716 778 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RN7SL39P-201ENST00000462264 297 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RPSAP37-201ENST00000470913 821 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RN7SL362P-201ENST00000494228 267 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 PPM1AP1-201ENST00000502740 1135 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 UGT2A3P7-201ENST00000510485 734 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 MTND2P32-201ENST00000521584 1038 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC004923.2-201ENST00000529649 369 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AP004609.2-201ENST00000532177 190 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 GLRXP2-201ENST00000555594 321 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC025918.2-201ENST00000558683 763 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AL078601.3-201ENST00000573303 535 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC023762.1-201ENST00000603280 584 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AL121652.1-201ENST00000608851 448 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AP001033.2-201ENST00000609701 1003 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RMST_5.1-201ENST00000618704 126 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC022400.9-201ENST00000623633 273 ntBASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms