Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GTF2IP11-201ENST00000526931 420 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 RPA2P3-201ENST00000533268 770 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL591167.1-201ENST00000607321 456 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL357153.4-201ENST00000620487 1016 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC003992.1-201ENST00000635364 557 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AP001541.1-201ENST00000623322 1904 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 PSG10P-201ENST00000501199 1500 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC024651.2-201ENST00000562480 2098 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 RNA5SP273-201ENST00000362484 113 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 RN7SKP81-201ENST00000365603 331 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 RPL31P15-201ENST00000449770 338 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 PSMA2P2-201ENST00000504319 686 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 SNORD46.2-201ENST00000516021 102 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 RNA5SP438-201ENST00000516561 112 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC022826.1-201ENST00000519383 805 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC027229.1-201ENST00000583887 253 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AL161912.3-201ENST00000605404 628 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 AC096708.4-201ENST00000620563 552 ntBASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA1Q9UND3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 MAPK10-261ENST00000641050 3109 ntBASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA1Q9UND3 AC120036.2-201ENST00000509729 1474 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AC096921.2-201ENST00000561507 1916 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 RNFT1P3-201ENST00000340898 1052 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AC245096.1-201ENST00000413104 546 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AC007562.1-201ENST00000421819 517 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 RPL23AP19-201ENST00000436229 369 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AC023274.2-201ENST00000445264 521 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 FTLP8-201ENST00000446770 267 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 RPS27AP3-201ENST00000453803 454 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.58□□□□□ -1.52
NPIPA1Q9UND3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms