Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AP002833.3-201ENST00000625075 2265 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC005034.3-201ENST00000604845 1747 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC023490.2-201ENST00000359859 470 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC112187.1-201ENST00000455837 479 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 ACA64.1-201ENST00000459171 127 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 RN7SL165P-201ENST00000477476 291 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 RPL7P51-201ENST00000490532 749 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 MTND3P3-201ENST00000505004 126 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 OR4H6P-201ENST00000563771 921 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC122134.1-202ENST00000569111 1201 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 MIR4776-2-201ENST00000580204 80 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.88□□□□□ -1.31
COL20A1Q9P218 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL20A1Q9P218 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL20A1Q9P218 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 KARSP1-201ENST00000451871 1752 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC068446.1-201ENST00000556425 1549 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 RNU6-618P-201ENST00000363518 112 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 RNA5SP500-201ENST00000364486 119 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 RN7SKP292-201ENST00000365522 317 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC096644.3-201ENST00000416788 338 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 NPM1P25-201ENST00000429734 854 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AL391987.1-201ENST00000441025 200 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AL355355.1-201ENST00000442900 793 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 MORF4L1P4-201ENST00000450245 976 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC092865.4-201ENST00000477936 615 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC114728.1-201ENST00000488289 483 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC104109.1-201ENST00000498563 436 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 MTATP6P1-201ENST00000514057 681 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 RN7SL753P-201ENST00000581238 290 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC011497.2-201ENST00000600255 639 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC091193.1-201ENST00000604640 448 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 AL021918.2-201ENST00000613415 194 ntBASIC6.87□□□□□ -1.31
COL20A1Q9P218 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 AC073342.2-201ENST00000595842 1800 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms