Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CDY8P-201ENST00000428380 1279 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AL138899.2-201ENST00000439139 499 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 CDY20P-201ENST00000447528 1279 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 RNU1-88P-201ENST00000459274 128 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 NDUFA5P5-201ENST00000468361 342 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 AL121594.2-201ENST00000541658 472 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 NANOGNBP2-201ENST00000544753 553 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 AC005726.4-201ENST00000582858 458 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 AL049840.6-202ENST00000603373 279 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 FAM27E4-201ENST00000605259 342 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 RPL12P48-201ENST00000605620 304 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 MIR1910-201ENST00000636955 80 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 AP004607.3-201ENST00000530354 3915 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 MFSD8-239ENST00000641590 2479 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 RAB5CP1-201ENST00000395972 580 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 EIF5AP4-201ENST00000441206 465 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 RSU1P1-201ENST00000453416 441 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 FRG2FP-204ENST00000453982 852 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 RNA5SP271-201ENST00000516700 88 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 HMGN2P36-201ENST00000529541 409 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 NPM1P42-201ENST00000560329 862 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.22□□□□□ -1.41
CISHQ9NSE2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CISHQ9NSE2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CISHQ9NSE2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.21□□□□□ -1.41
CISHQ9NSE2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CISHQ9NSE2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CISHQ9NSE2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.21□□□□□ -1.41
CISHQ9NSE2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CISHQ9NSE2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 AL591135.1-201ENST00000401578 5914 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 LYPLA1P3-201ENST00000402650 695 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 RPL12P16-201ENST00000431098 498 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 AL512637.1-201ENST00000439523 1231 ntBASIC6.21□□□□□ -1.42
CISHQ9NSE2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.21□□□□□ -1.42
CISHQ9NSE2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CISHQ9NSE2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms