Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 AC068726.1-201ENST00000610993 341 ntBASIC7.14□□□□□ -1.27
UPF2Q9HAU5 AL161912.4-201ENST00000623889 2468 ntBASIC7.14□□□□□ -1.27
UPF2Q9HAU5 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 AC119674.1-217ENST00000641942 1086 ntBASIC7.14□□□□□ -1.27
UPF2Q9HAU5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 ABCC13-202ENST00000463099 3842 ntBASIC7.14□□□□□ -1.27
UPF2Q9HAU5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF2Q9HAU5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC018717.1-201ENST00000457712 1505 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 ZNF37CP-201ENST00000406795 241 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AL139805.1-201ENST00000407837 289 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 OR10T1P-201ENST00000424327 947 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC002553.3-201ENST00000453002 341 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC008629.2-201ENST00000503783 483 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC110056.1-201ENST00000525759 911 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 AC007204.1-201ENST00000621794 555 ntBASIC7.13□□□□□ -1.27
UPF2Q9HAU5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF2Q9HAU5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 MTCO1P28-201ENST00000574177 1528 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC093671.1-201ENST00000624981 2929 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 RNU1-136P-201ENST00000384181 164 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 SNORA5.1-201ENST00000384275 131 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 U3.23-201ENST00000391132 200 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 NPM1P37-201ENST00000403105 874 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 RNA5SP231-201ENST00000410496 138 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 MEAF6P1-201ENST00000416092 327 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 RPSAP65-201ENST00000429660 595 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 HSPE1P27-201ENST00000430808 296 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 HMGN1P32-201ENST00000441744 256 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AL445991.1-201ENST00000450381 475 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC090602.1-201ENST00000469695 252 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC027796.1-201ENST00000575593 512 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 RFPL4AP6-201ENST00000616792 846 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 MFSD8-239ENST00000641590 2479 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF2Q9HAU5 AL034546.1-201ENST00000623740 3693 ntBASIC7.12□□□□□ -1.27
UPF2Q9HAU5 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
UPF2Q9HAU5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
UPF2Q9HAU5 SNORA21-201ENST00000362423 132 ntBASIC7.11□□□□□ -1.27
UPF2Q9HAU5 RNA5SP77-201ENST00000365394 120 ntBASIC7.11□□□□□ -1.27
UPF2Q9HAU5 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms