Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 HSPD1P9-201ENST00000420325 1636 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AL121839.2-201ENST00000565058 6943 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 RNU1-134P-201ENST00000362935 165 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 RPL35AP31-201ENST00000418340 337 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 SEPT14P12-201ENST00000442280 560 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 RPSAP40-201ENST00000442343 891 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AL512593.1-201ENST00000444758 779 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC068491.1-201ENST00000449539 1241 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CCDC11P1-201ENST00000503137 1162 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 OR7E99P-201ENST00000505750 922 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CR383658.1-201ENST00000514609 734 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC024405.1-201ENST00000532521 1042 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC026826.3-201ENST00000561747 158 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AL512652.1-201ENST00000619006 500 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC069542.2-201ENST00000624816 216 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC022325.1-201ENST00000502748 2199 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC092451.3-201ENST00000625067 1343 ntBASIC5.64□□□□□ -1.51
COL21A1Q96P44 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 XKRY2-202ENST00000623874 1581 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 XKRY-202ENST00000624960 1581 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL21A1Q96P44 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL21A1Q96P44 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 RNA5SP110-201ENST00000362638 115 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 RN7SKP166-201ENST00000410812 305 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 RPL6P30-201ENST00000443382 862 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 CUBNP2-201ENST00000443534 1139 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC009963.3-201ENST00000458090 486 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 CTSLP6-201ENST00000458273 1002 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 Vault.2-201ENST00000516519 98 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC009879.1-201ENST00000520029 839 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC244502.2-201ENST00000543361 851 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 AC073333.2-201ENST00000603589 769 ntBASIC5.63□□□□□ -1.51
COL21A1Q96P44 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
COL21A1Q96P44 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL21A1Q96P44 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms