Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC135626.1-201ENST00000556983 435 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL049779.3-201ENST00000557141 606 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL356801.1-201ENST00000559320 294 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 ZNF658B-201ENST00000602828 3408 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHROOM3Q8TF72 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SHROOM3Q8TF72 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
SHROOM3Q8TF72 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHROOM3Q8TF72 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 SNRPEP6-201ENST00000407465 277 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 RPSAP37-201ENST00000470913 821 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AL136038.1-201ENST00000497246 351 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 GAPDHP71-201ENST00000511530 1003 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 RNA5SP271-201ENST00000516700 88 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AC022826.1-201ENST00000519383 805 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AC093829.1-201ENST00000506662 1618 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 ZNF969P-201ENST00000510345 2341 ntBASIC6.08□□□□□ -1.44
SHROOM3Q8TF72 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 RPS26P38-201ENST00000414476 348 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 FMO7P-201ENST00000436045 768 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LDHAP1-201ENST00000509421 992 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 MIR6748-201ENST00000610433 71 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC116667.2-201ENST00000641075 823 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC011933.2-201ENST00000578539 2790 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 OR52B3P-201ENST00000314715 928 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 PSMA2P2-201ENST00000504319 686 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 Y_RNA.667-201ENST00000516212 107 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 OR7E158P-201ENST00000524483 910 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 SUMO2P15-201ENST00000604285 278 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms