Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AP005435.3-201ENST00000531260 3198 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC009962.1-201ENST00000567327 3813 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC125336.1-201ENST00000508893 2827 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 YWHAZP6-201ENST00000399764 738 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 MIR1275-201ENST00000408770 80 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC108479.1-201ENST00000431142 427 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 GAPDHP59-201ENST00000435908 267 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AL645936.1-201ENST00000441979 518 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 CUBNP2-201ENST00000443534 1139 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 MORF4-201ENST00000447135 971 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 RSU1P1-201ENST00000453416 441 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 RN7SL369P-201ENST00000477138 299 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 RN7SL714P-201ENST00000487050 298 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC018797.1-201ENST00000510791 255 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 RNA5SP441-201ENST00000516809 88 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 NPIPB14P-203ENST00000532298 987 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC005332.4-201ENST00000592752 579 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AL049840.6-201ENST00000604583 345 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC241377.1-201ENST00000619797 406 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AL136984.1-201ENST00000607611 1893 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AP000473.2-201ENST00000602659 1537 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC28Q86X40 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AC016583.1-201ENST00000624221 2431 ntBASIC5.32□□□□□ -1.56
LRRC28Q86X40 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC28Q86X40 AL137141.1-201ENST00000624622 4836 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 RNU1-65P-201ENST00000363919 148 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 RNA5SP279-201ENST00000365513 117 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 SNORA5.1-201ENST00000384275 131 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 VN1R12P-201ENST00000403778 876 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC245096.1-201ENST00000413104 546 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 PTCD2P2-201ENST00000415579 1095 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AL354893.1-201ENST00000433735 348 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC138761.5-201ENST00000433967 325 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 NPM1P18-201ENST00000434232 732 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC094019.1-201ENST00000434678 472 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 SOCS5P1-201ENST00000440415 949 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 CXCR2P1-202ENST00000443392 1074 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC068491.1-201ENST00000449539 1241 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 CTSLP6-201ENST00000458273 1002 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 RN7SL326P-201ENST00000477493 296 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 RPL23AP40-201ENST00000487630 390 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 ZNF519P4-201ENST00000514008 125 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 Vault.2-201ENST00000516519 98 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 RN7SKP70-201ENST00000516655 271 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms