Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 RN7SKP77-201ENST00000363261 353 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 RPL6P21-201ENST00000418672 846 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 IPPKP1-201ENST00000422501 768 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 GEMIN2P1-201ENST00000454246 752 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC084754.1-201ENST00000463466 464 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC090568.1-201ENST00000509499 856 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC114781.3-201ENST00000512083 142 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 SCARNA18.1-201ENST00000516330 83 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 TPM3P3-201ENST00000521343 354 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 SNX18P12-201ENST00000624821 759 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 SHQ1P1-201ENST00000437111 1544 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 AC091305.2-201ENST00000624049 1576 ntBASIC7.16□□□□□ -1.26
CTR9Q6PD62 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTR9Q6PD62 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.16□□□□□ -1.26
CTR9Q6PD62 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CTR9Q6PD62 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CTR9Q6PD62 SEPT7P2-202ENST00000398921 823 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AL096800.1-201ENST00000405326 893 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 RN7SKP151-201ENST00000410230 316 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AC116036.1-201ENST00000412199 367 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 BX284632.2-201ENST00000421091 399 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AL389925.1-201ENST00000432257 728 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AL512605.1-202ENST00000441919 381 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AL359955.2-201ENST00000445380 353 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CTR9Q6PD62 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 NPM1P5-201ENST00000557228 838 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 AP001962.1-201ENST00000624114 559 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 AC016542.2-201ENST00000624201 619 ntBASIC7.15□□□□□ -1.26
CTR9Q6PD62 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.15□□□□□ -1.26
CTR9Q6PD62 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CTR9Q6PD62 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
CTR9Q6PD62 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.15□□□□□ -1.27
CTR9Q6PD62 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
CTR9Q6PD62 AC012254.3-201ENST00000591183 2117 ntBASIC7.15□□□□□ -1.27
CTR9Q6PD62 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CTR9Q6PD62 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CTR9Q6PD62 AC016583.1-201ENST00000624221 2431 ntBASIC7.15□□□□□ -1.27
CTR9Q6PD62 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.14□□□□□ -1.27
CTR9Q6PD62 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTR9Q6PD62 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTR9Q6PD62 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTR9Q6PD62 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CTR9Q6PD62 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CTR9Q6PD62 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTR9Q6PD62 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTR9Q6PD62 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.14□□□□□ -1.27
CTR9Q6PD62 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CTR9Q6PD62 OR10R3P-201ENST00000361688 942 ntBASIC7.14□□□□□ -1.27
CTR9Q6PD62 RNU1-150P-201ENST00000362491 162 ntBASIC7.14□□□□□ -1.27
CTR9Q6PD62 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTR9Q6PD62 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms