Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3CQ6NXT2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3CQ6NXT2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3CQ6NXT2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3CQ6NXT2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.62□□□□□ -1.51
H3F3CQ6NXT2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3F3CQ6NXT2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AL096800.1-201ENST00000405326 893 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC007568.1-201ENST00000422912 471 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC021876.1-201ENST00000425959 359 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC013410.1-201ENST00000436223 1232 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 GEMIN2P1-201ENST00000454246 752 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC073594.1-201ENST00000462065 364 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC024587.1-201ENST00000505925 2157 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AP005639.1-201ENST00000526939 192 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC068305.2-201ENST00000550567 1205 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC027243.2-201ENST00000602530 724 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC100767.2-201ENST00000604840 693 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AF287957.1-201ENST00000607368 1595 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC105749.1-201ENST00000631338 2008 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 AC003992.1-201ENST00000635364 557 ntBASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3CQ6NXT2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC119674.1-202ENST00000641333 1860 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 NCOA4P2-201ENST00000340589 1813 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 MSL3P1-202ENST00000440028 1468 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC119674.1-213ENST00000641177 1386 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AL035660.1-201ENST00000422041 222 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 IPPKP1-201ENST00000422501 768 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 OR5W1P-201ENST00000423705 938 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 RPL23AP19-201ENST00000436229 369 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 NDUFS5P5-201ENST00000437256 321 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 TUBB4BP6-201ENST00000437576 479 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AL512605.1-202ENST00000441919 381 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AL359955.2-201ENST00000445380 353 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC016027.4-201ENST00000450866 277 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 HLA-DPA3-207ENST00000454398 229 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC011476.1-201ENST00000466725 307 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 CR383656.1-201ENST00000484916 377 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC006499.4-201ENST00000510947 694 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC110056.1-201ENST00000525759 911 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC107993.1-201ENST00000591343 684 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC132825.8-201ENST00000640783 297 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC116667.2-201ENST00000641075 823 ntBASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3CQ6NXT2 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 AC012254.3-201ENST00000591183 2117 ntBASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 CCNT2P1-201ENST00000423082 1315 ntBASIC5.59□□□□□ -1.51
H3F3CQ6NXT2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms