Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC073333.2-201ENST00000603589 769 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC114477.1-201ENST00000605097 605 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC019257.2-201ENST00000605539 497 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL159169.2-201ENST00000610061 1269 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL136097.3-201ENST00000611097 505 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC103798.2-201ENST00000624292 632 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AP003400.6-201ENST00000624698 740 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AP000550.3-201ENST00000637734 379 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AL121768.1-201ENST00000613917 2544 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC022164.1-201ENST00000568767 2673 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC092692.1-201ENST00000623625 2595 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC010894.1-201ENST00000313760 361 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 PEX12P1-201ENST00000400284 1048 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 RPL23AP17-201ENST00000401064 499 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AL589794.1-201ENST00000424971 390 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 VTI1BP4-201ENST00000427516 527 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AL606490.7-201ENST00000433136 191 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC079922.1-201ENST00000443291 359 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC239798.3-201ENST00000454459 408 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC009120.3-201ENST00000563335 499 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC090616.1-201ENST00000583895 447 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC012175.1-201ENST00000603755 531 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC092574.1-201ENST00000609771 420 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC079298.2-201ENST00000623885 459 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AL359955.1-201ENST00000455242 3275 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC092070.2-203ENST00000598377 3644 ntBASIC6.49□□□□□ -1.37
CCDC38Q502W7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC38Q502W7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC38Q502W7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 UGT2B24P-201ENST00000514441 1597 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 SNORD35A-201ENST00000363389 86 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL672167.2-201ENST00000377164 879 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 MRPS6P2-201ENST00000381143 370 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC245036.1-201ENST00000391727 309 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 RN7SKP281-201ENST00000410472 352 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL354868.1-201ENST00000417077 482 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC007562.1-201ENST00000421819 517 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC046176.1-201ENST00000435260 1170 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL390879.1-201ENST00000439143 386 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 RPL5P10-201ENST00000445207 894 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC023274.2-201ENST00000445264 521 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL020997.1-201ENST00000446554 349 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 VN1R48P-201ENST00000448149 1036 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 Z83838.1-202ENST00000456225 839 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 RN7SL267P-201ENST00000485107 261 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 SUMO2P4-201ENST00000504193 276 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms