Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SOX4Q06945 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SOX4Q06945 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SOX4Q06945 RNU6-236P-201ENST00000363886 106 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 RNU4-51P-201ENST00000364206 140 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC096644.3-201ENST00000416788 338 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX4Q06945 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX4Q06945 AL160175.1-201ENST00000428124 247 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX4Q06945 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 PTGES3P1-201ENST00000439531 483 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 RPL12P49-201ENST00000441100 121 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AP000936.2-201ENST00000447151 681 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 MEF2AP1-201ENST00000454867 863 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 RN7SL83P-201ENST00000468131 297 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX4Q06945 AC068724.1-201ENST00000487100 792 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 RPS4XP23-201ENST00000487801 237 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 RPS27AP16-201ENST00000492222 470 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 OR2A3P-201ENST00000493774 953 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 MINOS1P4-201ENST00000515470 318 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 EEF1B2P2-201ENST00000519625 676 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
SOX4Q06945 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.39□□□□□ -1.23
SOX4Q06945 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 AL512347.1-201ENST00000566420 503 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
SOX4Q06945 AC015688.2-201ENST00000584523 262 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 AC036176.3-201ENST00000602456 418 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC007255.2-201ENST00000604053 631 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC116651.1-201ENST00000609724 556 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 AC006328.2-201ENST00000623198 397 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 AC012005.2-201ENST00000624333 397 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 SNORA16A-202ENST00000628458 135 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX4Q06945 AL359396.1-201ENST00000623151 2376 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 LINC01616-201ENST00000561816 2280 ntBASIC7.39□□□□□ -1.23
SOX4Q06945 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX4Q06945 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SOX4Q06945 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 AC125603.4-201ENST00000621942 2699 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 UGT2B25P-201ENST00000511504 1586 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 RBPJP6-201ENST00000411556 1431 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 MAPK10-371ENST00000641952 5209 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SOX4Q06945 NEK2P2-201ENST00000438441 1338 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 RNU1-5P-201ENST00000362684 144 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 SNORA7A-201ENST00000384765 139 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 AC026310.1-201ENST00000396004 378 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 OR8G2P-201ENST00000412796 908 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 RPL7P53-201ENST00000421245 739 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 CDC42P6-201ENST00000421246 576 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AL022331.1-201ENST00000429025 477 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 DEFA11P-201ENST00000446470 261 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 LINC00888-204ENST00000487386 421 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 OR5H4P-201ENST00000510851 923 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.38□□□□□ -1.23
SOX4Q06945 OR4R3P-201ENST00000525084 838 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms