Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL589765.6-201ENST00000601909 549 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC022106.1-201ENST00000612834 766 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL137067.2-201ENST00000621202 131 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL161756.3-201ENST00000641216 2071 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC024587.1-201ENST00000505925 2157 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RNA5SP375-201ENST00000362975 119 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RNA5SP346-201ENST00000363541 121 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 VIM2P-201ENST00000402383 1294 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 PRELID1P1-201ENST00000403549 660 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 MTND2P12-201ENST00000417560 1252 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RPS7P14-201ENST00000426405 583 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RPSAP65-201ENST00000429660 595 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 GAPDHP19-201ENST00000431768 1005 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC073410.1-201ENST00000435125 589 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 OR2L9P-201ENST00000444456 913 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RPS18P1-201ENST00000447840 458 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RPL23AP60-201ENST00000450011 454 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AL133351.3-201ENST00000454998 193 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RBMY2HP-201ENST00000457961 720 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RN7SL393P-201ENST00000463588 296 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC114324.2-202ENST00000503812 134 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC105420.1-201ENST00000504389 582 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 SNX18P24-201ENST00000505249 671 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC113191.1-201ENST00000517759 403 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 TPM3P3-201ENST00000521343 354 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AP001858.2-201ENST00000536213 601 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RNU4ATAC-201ENST00000580972 127 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC006272.2-201ENST00000594725 163 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC211486.4-201ENST00000621495 113 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AL122023.1-201ENST00000622847 530 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC004076.2-201ENST00000620532 3323 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 AC003985.2-201ENST00000562268 1669 ntBASIC4.6□□□□□ -1.67
HIST1H1AQ02539 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HIST1H1AQ02539 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms