Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM4P67936 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 TCP11X1-202ENST00000622971 1372 ntBASIC6.56□□□□□ -1.36
TPM4P67936 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.55□□□□□ -1.36
TPM4P67936 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AC217777.1-201ENST00000570034 1471 ntBASIC6.55□□□□□ -1.36
TPM4P67936 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM4P67936 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
TPM4P67936 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TPM4P67936 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TPM4P67936 RNA5SP85-201ENST00000365378 119 ntBASIC6.55□□□□□ -1.36
TPM4P67936 RN7SKP69-201ENST00000365390 305 ntBASIC6.55□□□□□ -1.36
TPM4P67936 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
TPM4P67936 AL132875.1-201ENST00000403623 949 ntBASIC6.55□□□□□ -1.36
TPM4P67936 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM4P67936 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AC117434.1-201ENST00000419971 836 ntBASIC6.55□□□□□ -1.36
TPM4P67936 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.55□□□□□ -1.36
TPM4P67936 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM4P67936 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM4P67936 SEPT14P12-201ENST00000442280 560 ntBASIC6.55□□□□□ -1.36
TPM4P67936 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 RPL31P11-202ENST00000454082 372 ntBASIC6.55□□□□□ -1.36
TPM4P67936 RARRES2P3-201ENST00000457739 473 ntBASIC6.55□□□□□ -1.36
TPM4P67936 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM4P67936 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.55□□□□□ -1.36
TPM4P67936 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.55□□□□□ -1.36
TPM4P67936 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.55□□□□□ -1.36
TPM4P67936 OR5D2P-201ENST00000524390 911 ntBASIC6.55□□□□□ -1.36
TPM4P67936 OR4A43P-201ENST00000532938 908 ntBASIC6.55□□□□□ -1.36
TPM4P67936 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.55□□□□□ -1.36
TPM4P67936 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 HIRAP1-201ENST00000605318 787 ntBASIC6.55□□□□□ -1.36
TPM4P67936 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.55□□□□□ -1.36
TPM4P67936 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM4P67936 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TPM4P67936 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM4P67936 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM4P67936 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM4P67936 AL138820.1-201ENST00000617901 5305 ntBASIC6.55□□□□□ -1.36
TPM4P67936 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
TPM4P67936 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.54□□□□□ -1.36
TPM4P67936 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
TPM4P67936 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
TPM4P67936 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM4P67936 MIR138-2-201ENST00000384916 84 ntBASIC6.54□□□□□ -1.36
TPM4P67936 SNRPEP6-201ENST00000407465 277 ntBASIC6.54□□□□□ -1.36
TPM4P67936 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM4P67936 MTND2P40-201ENST00000436718 841 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM4P67936 RPL5P25-201ENST00000441148 775 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM4P67936 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM4P67936 RN7SL267P-201ENST00000485107 261 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AC105420.1-201ENST00000504389 582 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM4P67936 RNA5SP75-201ENST00000516841 111 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM4P67936 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.54□□□□□ -1.36
TPM4P67936 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.54□□□□□ -1.36
TPM4P67936 AL589765.6-201ENST00000601909 549 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 LSM1P2-201ENST00000604911 322 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AC007786.3-201ENST00000615154 596 ntBASIC6.54□□□□□ -1.36
TPM4P67936 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TPM4P67936 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 AC006600.2-201ENST00000624834 2506 ntBASIC6.54□□□□□ -1.36
TPM4P67936 AC090220.1-201ENST00000593078 1699 ntBASIC6.54□□□□□ -1.36
TPM4P67936 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
TPM4P67936 RPS2P45-201ENST00000469997 2057 ntBASIC6.54□□□□□ -1.36
TPM4P67936 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 AC125336.1-201ENST00000508893 2827 ntBASIC6.54□□□□□ -1.36
TPM4P67936 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM4P67936 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 FBXL21-201ENST00000297158 1305 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms