Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 TMEM97P2-201ENST00000517841 403 ntBASIC4.95□□□□□ -1.62
LMO4P61968 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.95□□□□□ -1.62
LMO4P61968 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 AC087468.1-201ENST00000604365 630 ntBASIC4.95□□□□□ -1.62
LMO4P61968 FAM27E4-201ENST00000605259 342 ntBASIC4.95□□□□□ -1.62
LMO4P61968 AC007620.3-201ENST00000608131 497 ntBASIC4.95□□□□□ -1.62
LMO4P61968 AC024933.1-201ENST00000608472 348 ntBASIC4.95□□□□□ -1.62
LMO4P61968 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.95□□□□□ -1.62
LMO4P61968 RN7SL787P-201ENST00000613000 284 ntBASIC4.95□□□□□ -1.62
LMO4P61968 AL450226.2-201ENST00000622913 439 ntBASIC4.95□□□□□ -1.62
LMO4P61968 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LMO4P61968 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC4.95□□□□□ -1.62
LMO4P61968 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 AC016583.1-201ENST00000624221 2431 ntBASIC4.95□□□□□ -1.62
LMO4P61968 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC4.94□□□□□ -1.62
LMO4P61968 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 PABPC1P8-201ENST00000452851 2086 ntBASIC4.94□□□□□ -1.62
LMO4P61968 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 AC090220.1-201ENST00000593078 1699 ntBASIC4.94□□□□□ -1.62
LMO4P61968 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 MIR375-201ENST00000362103 64 ntBASIC4.94□□□□□ -1.62
LMO4P61968 SNORD8-201ENST00000363915 110 ntBASIC4.94□□□□□ -1.62
LMO4P61968 RNA5SP242-201ENST00000364171 118 ntBASIC4.94□□□□□ -1.62
LMO4P61968 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 MTND3P20-201ENST00000407663 186 ntBASIC4.94□□□□□ -1.62
LMO4P61968 SDHDP6-201ENST00000414693 480 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 RPL36P18-201ENST00000419316 318 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC079355.1-201ENST00000421770 223 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC007562.1-201ENST00000421819 517 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AL445928.1-201ENST00000435545 222 ntBASIC4.94□□□□□ -1.62
LMO4P61968 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 AC023274.2-201ENST00000445264 521 ntBASIC4.94□□□□□ -1.62
LMO4P61968 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.94□□□□□ -1.62
LMO4P61968 AL022319.1-201ENST00000458183 1167 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC023141.9-201ENST00000458734 412 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC104164.1-201ENST00000460282 590 ntBASIC4.94□□□□□ -1.62
LMO4P61968 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 AC124945.1-201ENST00000485133 188 ntBASIC4.94□□□□□ -1.62
LMO4P61968 RPL23AP40-201ENST00000487630 390 ntBASIC4.94□□□□□ -1.62
LMO4P61968 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.94□□□□□ -1.62
LMO4P61968 AC096754.1-201ENST00000508904 818 ntBASIC4.94□□□□□ -1.62
LMO4P61968 SETP12-201ENST00000514068 805 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.94□□□□□ -1.62
LMO4P61968 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LMO4P61968 AC112191.2-201ENST00000522428 333 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.94□□□□□ -1.62
LMO4P61968 AC091078.2-201ENST00000557145 559 ntBASIC4.94□□□□□ -1.62
LMO4P61968 FAM72A-208ENST00000607379 1139 ntBASIC4.94□□□□□ -1.62
LMO4P61968 MIR6768-201ENST00000610734 72 ntBASIC4.94□□□□□ -1.62
LMO4P61968 RNA5SP440-201ENST00000612665 119 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC106730.3-201ENST00000624568 641 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC063952.1-203ENST00000634410 658 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 PARP4P2-201ENST00000446672 3326 ntBASIC4.94□□□□□ -1.62
LMO4P61968 AC005261.2-201ENST00000593427 4258 ntBASIC4.94□□□□□ -1.62
LMO4P61968 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 DMD-205ENST00000359836 7339 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.94□□□□□ -1.62
LMO4P61968 AP000866.6-201ENST00000638898 3579 ntBASIC4.94□□□□□ -1.62
LMO4P61968 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMO4P61968 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
LMO4P61968 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms