Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MIR3157-201ENST00000578688 85 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AP001357.1-201ENST00000586304 1053 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AC245052.7-201ENST00000601161 359 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.92□□□□□ -1.46
RPS3AP61247 AL356986.1-201ENST00000604085 341 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.92□□□□□ -1.46
RPS3AP61247 SNORD96A-201ENST00000606577 79 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AL589743.6-201ENST00000611025 117 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.92□□□□□ -1.46
RPS3AP61247 AL158062.1-201ENST00000619632 745 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AC006213.5-201ENST00000619673 288 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.92□□□□□ -1.46
RPS3AP61247 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPS3AP61247 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.92□□□□□ -1.46
RPS3AP61247 AP005435.3-201ENST00000531260 3198 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 AC011815.2-201ENST00000618230 2021 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPS3AP61247 AC022613.3-201ENST00000560740 1346 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 DNM1P47-203ENST00000571780 12667 ntBASIC5.92□□□□□ -1.46
RPS3AP61247 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.92□□□□□ -1.46
RPS3AP61247 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPS3AP61247 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.92□□□□□ -1.46
RPS3AP61247 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 AL359976.1-201ENST00000418655 3528 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 RN7SKP81-201ENST00000365603 331 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RPS3AP61247 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RPS3AP61247 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 VIM2P-201ENST00000402383 1294 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 HMGA1P8-201ENST00000414130 321 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 FAR1P1-201ENST00000427163 934 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AL590399.2-201ENST00000427536 309 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.91□□□□□ -1.46
RPS3AP61247 OR6R1P-201ENST00000431838 940 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.91□□□□□ -1.46
RPS3AP61247 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.91□□□□□ -1.46
RPS3AP61247 AC092601.1-201ENST00000444526 383 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 CCNJP1-201ENST00000450600 1149 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 CCNJP2-201ENST00000457810 1163 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 RPL9P15-201ENST00000491096 532 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 RPL19P11-201ENST00000495944 589 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 HMGB1P47-201ENST00000511281 589 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC067904.2-201ENST00000517322 1283 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.91□□□□□ -1.46
RPS3AP61247 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 AC124891.1-201ENST00000536322 519 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.91□□□□□ -1.46
RPS3AP61247 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.91□□□□□ -1.46
RPS3AP61247 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.91□□□□□ -1.46
RPS3AP61247 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.91□□□□□ -1.46
RPS3AP61247 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.91□□□□□ -1.46
RPS3AP61247 GAPDHP41-201ENST00000613707 975 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 AC020923.1-201ENST00000624021 917 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 CFTRP2-201ENST00000634304 199 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.91□□□□□ -1.46
RPS3AP61247 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.91□□□□□ -1.46
RPS3AP61247 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPS3AP61247 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.91□□□□□ -1.46
RPS3AP61247 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPS3AP61247 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPS3AP61247 AC022325.1-201ENST00000502748 2199 ntBASIC5.9□□□□□ -1.46
RPS3AP61247 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.9□□□□□ -1.46
RPS3AP61247 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.9□□□□□ -1.46
RPS3AP61247 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.9□□□□□ -1.46
RPS3AP61247 AC023245.2-201ENST00000530760 2978 ntBASIC5.9□□□□□ -1.46
RPS3AP61247 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RPS3AP61247 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.9□□□□□ -1.46
RPS3AP61247 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RPS3AP61247 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPS3AP61247 RNA5SP485-201ENST00000365053 119 ntBASIC5.9□□□□□ -1.46
RPS3AP61247 RNA5SP85-201ENST00000365378 119 ntBASIC5.9□□□□□ -1.46
RPS3AP61247 SNORA64.3-201ENST00000365647 134 ntBASIC5.9□□□□□ -1.46
RPS3AP61247 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPS3AP61247 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPS3AP61247 RPL10P10-201ENST00000403509 664 ntBASIC5.9□□□□□ -1.46
RPS3AP61247 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms