Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC083855.1-201ENST00000440041 258 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.97□□□□□ -1.45
SUMO3P55854 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.97□□□□□ -1.45
SUMO3P55854 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.97□□□□□ -1.45
SUMO3P55854 RPL23AP64-201ENST00000469465 435 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 RN7SL502P-201ENST00000481857 290 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.97□□□□□ -1.45
SUMO3P55854 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 AC093870.1-201ENST00000506837 213 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 SNORA31.13-201ENST00000516624 135 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 AC034205.1-201ENST00000520621 638 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.97□□□□□ -1.45
SUMO3P55854 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.97□□□□□ -1.45
SUMO3P55854 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.97□□□□□ -1.45
SUMO3P55854 AP003717.3-201ENST00000544832 1180 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.97□□□□□ -1.45
SUMO3P55854 AL049830.4-201ENST00000555149 351 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.97□□□□□ -1.45
SUMO3P55854 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.97□□□□□ -1.45
SUMO3P55854 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.97□□□□□ -1.45
SUMO3P55854 RPL29P33-201ENST00000587474 316 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AP002884.5-201ENST00000595053 1132 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AL022067.1-201ENST00000602426 454 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AL078623.1-201ENST00000602702 907 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 RPP40P2-201ENST00000603596 712 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AC112220.2-201ENST00000605513 533 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 SNORD96A-201ENST00000606577 79 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.97□□□□□ -1.45
SUMO3P55854 AC116165.3-201ENST00000614524 400 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 MIR6849-201ENST00000618543 69 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AL450226.2-201ENST00000622913 439 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 CLUHP10-201ENST00000631979 980 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.97□□□□□ -1.45
SUMO3P55854 AC135068.11-201ENST00000636378 921 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SUMO3P55854 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 AC003973.3-201ENST00000624863 2822 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 RAD17P2-201ENST00000451754 1977 ntBASIC5.97□□□□□ -1.45
SUMO3P55854 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SUMO3P55854 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.96□□□□□ -1.45
SUMO3P55854 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SUMO3P55854 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SUMO3P55854 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SUMO3P55854 AC011815.2-201ENST00000618230 2021 ntBASIC5.96□□□□□ -1.45
SUMO3P55854 CDC27P2-201ENST00000425026 1922 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SUMO3P55854 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.96□□□□□ -1.46
SUMO3P55854 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SUMO3P55854 RNA5SP308-201ENST00000362532 115 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 RNA5SP512-201ENST00000364550 120 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.96□□□□□ -1.46
SUMO3P55854 RNU4-31P-201ENST00000384211 141 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 ARSFP1-201ENST00000398758 477 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 RNA5SP155-201ENST00000411154 129 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.96□□□□□ -1.46
SUMO3P55854 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.96□□□□□ -1.46
SUMO3P55854 AC234781.4-201ENST00000419384 244 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AL139184.1-202ENST00000422303 222 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.96□□□□□ -1.46
SUMO3P55854 MTATP6P17-201ENST00000431030 672 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AL035458.1-201ENST00000433096 585 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 HMGB3P10-201ENST00000434734 572 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AC092106.2-201ENST00000436597 487 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 MED6P1-201ENST00000439659 713 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 COL11A2P1-205ENST00000441798 676 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 RPL7P61-201ENST00000451721 751 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.96□□□□□ -1.46
SUMO3P55854 AL034369.1-201ENST00000453808 477 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 HSPE1P22-201ENST00000456856 327 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AC236972.4-201ENST00000458091 963 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 TPT1P1-201ENST00000458495 518 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.96□□□□□ -1.46
SUMO3P55854 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SUMO3P55854 RPS20P4-201ENST00000461659 355 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 RPL19P11-201ENST00000495944 589 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 H3F3AP3-201ENST00000497682 407 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 CDH12P2-201ENST00000504393 298 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.96□□□□□ -1.46
SUMO3P55854 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.96□□□□□ -1.46
SUMO3P55854 RNU6-1308P-201ENST00000516817 103 ntBASIC5.96□□□□□ -1.46
SUMO3P55854 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms