Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH6P55285 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.15□□□□□ -1.43
CDH6P55285 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CDH6P55285 AC006600.2-201ENST00000624834 2506 ntBASIC6.15□□□□□ -1.43
CDH6P55285 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH6P55285 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CDH6P55285 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 RN7SKP77-201ENST00000363261 353 ntBASIC6.14□□□□□ -1.43
CDH6P55285 RN7SKP128-201ENST00000364270 303 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH6P55285 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 RPS4XP5-201ENST00000419038 768 ntBASIC6.14□□□□□ -1.43
CDH6P55285 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH6P55285 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 RPS12P17-201ENST00000438591 377 ntBASIC6.14□□□□□ -1.43
CDH6P55285 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH6P55285 AC079080.1-201ENST00000479841 822 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH6P55285 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH6P55285 MIR2117-201ENST00000516780 80 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH6P55285 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDH6P55285 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH6P55285 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH6P55285 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH6P55285 GARSP1-201ENST00000570895 719 ntBASIC6.14□□□□□ -1.43
CDH6P55285 TXNP4-201ENST00000575018 310 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH6P55285 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH6P55285 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH6P55285 AL049840.6-201ENST00000604583 345 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC091167.5-201ENST00000605689 894 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AL445670.1-201ENST00000618889 801 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AL136228.1-201ENST00000622221 319 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AC073592.6-201ENST00000624271 415 ntBASIC6.14□□□□□ -1.43
CDH6P55285 AP000550.3-201ENST00000637734 379 ntBASIC6.14□□□□□ -1.43
CDH6P55285 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH6P55285 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDH6P55285 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 AC093225.1-201ENST00000506867 1408 ntBASIC6.14□□□□□ -1.43
CDH6P55285 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH6P55285 AC140479.2-201ENST00000421567 3130 ntBASIC6.14□□□□□ -1.43
CDH6P55285 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 RPS2P45-201ENST00000469997 2057 ntBASIC6.13□□□□□ -1.43
CDH6P55285 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH6P55285 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 SELENOWP1-201ENST00000322792 252 ntBASIC6.13□□□□□ -1.43
CDH6P55285 RN7SKP187-201ENST00000365536 330 ntBASIC6.13□□□□□ -1.43
CDH6P55285 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 SEPT7P2-202ENST00000398921 823 ntBASIC6.13□□□□□ -1.43
CDH6P55285 AC099535.1-201ENST00000408928 371 ntBASIC6.13□□□□□ -1.43
CDH6P55285 RNA5SP431-201ENST00000410312 120 ntBASIC6.13□□□□□ -1.43
CDH6P55285 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH6P55285 BMS1P10-201ENST00000443754 1120 ntBASIC6.13□□□□□ -1.43
CDH6P55285 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH6P55285 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH6P55285 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH6P55285 RN7SKP238-201ENST00000516483 249 ntBASIC6.13□□□□□ -1.43
CDH6P55285 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 AC078899.1-201ENST00000521432 1185 ntBASIC6.13□□□□□ -1.43
CDH6P55285 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH6P55285 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH6P55285 AC024405.1-201ENST00000532521 1042 ntBASIC6.13□□□□□ -1.43
CDH6P55285 AC006512.2-201ENST00000543250 486 ntBASIC6.13□□□□□ -1.43
CDH6P55285 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH6P55285 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH6P55285 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH6P55285 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH6P55285 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDH6P55285 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDH6P55285 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms