Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL031123.3-201ENST00000623345 1837 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 U3.7-201ENST00000363668 216 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 OR2W4P-201ENST00000406496 926 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.8□□□□□ -1.32
HMGCS2P54868 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.8□□□□□ -1.32
HMGCS2P54868 FRG2FP-204ENST00000453982 852 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC073581.1-201ENST00000519036 575 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.8□□□□□ -1.32
HMGCS2P54868 MRPS16P1-201ENST00000523462 412 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC007494.1-201ENST00000562293 760 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC016769.4-201ENST00000616893 535 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC018445.2-201ENST00000622987 260 ntBASIC6.8□□□□□ -1.32
HMGCS2P54868 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGCS2P54868 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGCS2P54868 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HMGCS2P54868 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
HMGCS2P54868 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC079753.1-201ENST00000623243 3868 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HMGCS2P54868 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
HMGCS2P54868 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC007394.1-201ENST00000421941 531 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGCS2P54868 AL663074.2-201ENST00000440621 479 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC023141.8-201ENST00000442554 208 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGCS2P54868 AL022319.1-201ENST00000458183 1167 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 RPL32P33-201ENST00000487023 394 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC009120.1-201ENST00000493458 473 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGCS2P54868 OR4A42P-201ENST00000531397 938 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGCS2P54868 MIR4260-201ENST00000583107 67 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGCS2P54868 IMMP1LP3-201ENST00000604197 224 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 AC021766.1-201ENST00000624404 741 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 AC007683.2-201ENST00000624681 714 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 LINC02019-201ENST00000608605 2060 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGCS2P54868 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
HMGCS2P54868 C4BPAP1-201ENST00000415474 1893 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGCS2P54868 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGCS2P54868 AC078880.4-201ENST00000617627 1749 ntBASIC6.79□□□□□ -1.32
HMGCS2P54868 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGCS2P54868 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMGCS2P54868 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGCS2P54868 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 AC114786.1-201ENST00000512892 1415 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 USP9YP3-201ENST00000434481 1766 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGCS2P54868 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 RMRPP5-201ENST00000411156 267 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 MYL6P5-201ENST00000412707 459 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 AL357752.1-201ENST00000412817 349 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGCS2P54868 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGCS2P54868 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGCS2P54868 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGCS2P54868 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms