Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 OR3D1P-201ENST00000438288 955 ntBASIC6.62□□□□□ -1.35
COPB1P53618 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 MTCO3P43-201ENST00000440974 771 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AC114878.1-201ENST00000441166 358 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 SDC4P-201ENST00000453285 601 ntBASIC6.62□□□□□ -1.35
COPB1P53618 CYCSP53-201ENST00000455540 265 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AC092905.1-201ENST00000467527 949 ntBASIC6.62□□□□□ -1.35
COPB1P53618 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AC093719.1-201ENST00000480427 441 ntBASIC6.62□□□□□ -1.35
COPB1P53618 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 AC090058.1-201ENST00000498788 435 ntBASIC6.62□□□□□ -1.35
COPB1P53618 ST13P12-201ENST00000508958 1094 ntBASIC6.62□□□□□ -1.35
COPB1P53618 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 RN7SKP288-201ENST00000516227 268 ntBASIC6.62□□□□□ -1.35
COPB1P53618 snoU109.5-201ENST00000516231 132 ntBASIC6.62□□□□□ -1.35
COPB1P53618 RN7SKP183-201ENST00000517169 324 ntBASIC6.62□□□□□ -1.35
COPB1P53618 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 AC107958.1-201ENST00000556576 290 ntBASIC6.62□□□□□ -1.35
COPB1P53618 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 AC234775.3-201ENST00000564612 656 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AP001357.1-201ENST00000586304 1053 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.62□□□□□ -1.35
COPB1P53618 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.62□□□□□ -1.35
COPB1P53618 GAPDHP41-201ENST00000613707 975 ntBASIC6.62□□□□□ -1.35
COPB1P53618 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AL355974.3-201ENST00000617383 467 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 AC000095.2-202ENST00000637415 154 ntBASIC6.62□□□□□ -1.35
COPB1P53618 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 AC119674.1-202ENST00000641333 1860 ntBASIC6.62□□□□□ -1.35
COPB1P53618 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.61□□□□□ -1.35
COPB1P53618 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.61□□□□□ -1.35
COPB1P53618 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
COPB1P53618 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COPB1P53618 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COPB1P53618 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.61□□□□□ -1.35
COPB1P53618 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.61□□□□□ -1.35
COPB1P53618 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.61□□□□□ -1.35
COPB1P53618 RNU6-1176P-201ENST00000390955 107 ntBASIC6.61□□□□□ -1.35
COPB1P53618 MYL6P5-201ENST00000412707 459 ntBASIC6.61□□□□□ -1.35
COPB1P53618 GABARAPL3-201ENST00000412799 354 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.61□□□□□ -1.35
COPB1P53618 HSFY7P-201ENST00000432672 318 ntBASIC6.61□□□□□ -1.35
COPB1P53618 MTND4P15-201ENST00000437913 1033 ntBASIC6.61□□□□□ -1.35
COPB1P53618 HSFY8P-201ENST00000437934 318 ntBASIC6.61□□□□□ -1.35
COPB1P53618 HSFY5P-201ENST00000453726 309 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AP000547.1-201ENST00000454360 617 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AC099670.1-201ENST00000455141 783 ntBASIC6.61□□□□□ -1.35
COPB1P53618 OSTCP1-201ENST00000455507 450 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AC090958.1-201ENST00000511122 351 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AP003033.2-201ENST00000528901 805 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.61□□□□□ -1.35
COPB1P53618 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.61□□□□□ -1.35
COPB1P53618 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.61□□□□□ -1.35
COPB1P53618 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.61□□□□□ -1.35
COPB1P53618 MIR212-201ENST00000586026 110 ntBASIC6.61□□□□□ -1.35
COPB1P53618 GMCL1P2-201ENST00000605230 823 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.61□□□□□ -1.35
COPB1P53618 AL122023.1-201ENST00000622847 530 ntBASIC6.61□□□□□ -1.35
COPB1P53618 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.61□□□□□ -1.35
COPB1P53618 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
COPB1P53618 THAP12P9-201ENST00000503971 2360 ntBASIC6.61□□□□□ -1.35
COPB1P53618 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COPB1P53618 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.61□□□□□ -1.35
COPB1P53618 AC022325.1-201ENST00000502748 2199 ntBASIC6.61□□□□□ -1.35
COPB1P53618 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms