Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.6□□□□□ -1.35
NEK3P51956 MTCYBP19-201ENST00000517463 1124 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.6□□□□□ -1.35
NEK3P51956 AP003080.1-202ENST00000526526 915 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.6□□□□□ -1.35
NEK3P51956 AC092451.2-201ENST00000538746 658 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC073916.1-201ENST00000545095 130 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.6□□□□□ -1.35
NEK3P51956 AC021483.2-201ENST00000567415 758 ntBASIC6.6□□□□□ -1.35
NEK3P51956 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.6□□□□□ -1.35
NEK3P51956 AC063977.7-201ENST00000594454 337 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC084373.1-201ENST00000603311 235 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AL356986.1-201ENST00000604085 341 ntBASIC6.6□□□□□ -1.35
NEK3P51956 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 AC025171.4-201ENST00000607250 1047 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC005828.7-201ENST00000607331 556 ntBASIC6.6□□□□□ -1.35
NEK3P51956 uc_338.29-201ENST00000615099 168 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 AL121936.2-201ENST00000641935 662 ntBASIC6.6□□□□□ -1.35
NEK3P51956 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.6□□□□□ -1.35
NEK3P51956 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 MAPK10-287ENST00000641217 3037 ntBASIC6.6□□□□□ -1.35
NEK3P51956 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 PPBPP2-201ENST00000513150 1362 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC119674.1-213ENST00000641177 1386 ntBASIC6.59□□□□□ -1.35
NEK3P51956 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 AC074141.1-201ENST00000588129 2995 ntBASIC6.59□□□□□ -1.35
NEK3P51956 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 SNORD8-201ENST00000363915 110 ntBASIC6.59□□□□□ -1.35
NEK3P51956 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 RNU6-1320P-201ENST00000390838 107 ntBASIC6.59□□□□□ -1.35
NEK3P51956 RNU6-1269P-201ENST00000391139 107 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AL391419.1-201ENST00000398901 1275 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AL391422.1-201ENST00000402155 436 ntBASIC6.59□□□□□ -1.35
NEK3P51956 OR2W4P-201ENST00000406496 926 ntBASIC6.59□□□□□ -1.35
NEK3P51956 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 AC116036.1-201ENST00000412199 367 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 PA2G4P6-201ENST00000438325 1197 ntBASIC6.59□□□□□ -1.35
NEK3P51956 ELOCP3-201ENST00000439303 348 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 RBMY2TP-201ENST00000451162 947 ntBASIC6.59□□□□□ -1.35
NEK3P51956 CALM1P2-201ENST00000452941 448 ntBASIC6.59□□□□□ -1.35
NEK3P51956 RNU6-599P-201ENST00000459383 107 ntBASIC6.59□□□□□ -1.35
NEK3P51956 RNU6-1193P-201ENST00000459461 107 ntBASIC6.59□□□□□ -1.35
NEK3P51956 RN7SL39P-201ENST00000462264 297 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC078857.1-201ENST00000469870 667 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC131392.1-201ENST00000506490 633 ntBASIC6.59□□□□□ -1.35
NEK3P51956 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 AC093816.1-201ENST00000515076 913 ntBASIC6.59□□□□□ -1.35
NEK3P51956 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC135983.3-201ENST00000528049 1226 ntBASIC6.59□□□□□ -1.35
NEK3P51956 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 RN7SL230P-201ENST00000580835 303 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 ZNF92P2-201ENST00000600543 1059 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AL589765.6-201ENST00000601909 549 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 AL137246.2-201ENST00000613439 662 ntBASIC6.59□□□□□ -1.35
NEK3P51956 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC245389.2-201ENST00000616023 576 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AC242843.1-201ENST00000618702 573 ntBASIC6.59□□□□□ -1.35
NEK3P51956 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.59□□□□□ -1.35
NEK3P51956 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 RNU6-368P-201ENST00000620928 107 ntBASIC6.59□□□□□ -1.35
NEK3P51956 RNU6-538P-201ENST00000622329 107 ntBASIC6.59□□□□□ -1.35
NEK3P51956 AP006248.3-201ENST00000623580 594 ntBASIC6.59□□□□□ -1.35
NEK3P51956 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEK3P51956 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NEK3P51956 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.59□□□□□ -1.35
NEK3P51956 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms