Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NF1P10-201ENST00000613227 742 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 AC126175.1-201ENST00000617041 758 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 AC069542.2-201ENST00000624816 216 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.57□□□□□ -1.36
CLCN3P51790 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.57□□□□□ -1.36
CLCN3P51790 MIR4302-201ENST00000638058 60 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
CLCN3P51790 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.57□□□□□ -1.36
CLCN3P51790 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.57□□□□□ -1.36
CLCN3P51790 PDZK1P1-202ENST00000425209 1350 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CLCN3P51790 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.56□□□□□ -1.36
CLCN3P51790 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.56□□□□□ -1.36
CLCN3P51790 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CLCN3P51790 RN7SKP206-201ENST00000410823 293 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 CASKP1-201ENST00000412870 582 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 SUMO2P3-201ENST00000438311 288 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AC079922.1-201ENST00000443291 359 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AL445665.1-202ENST00000452436 324 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.56□□□□□ -1.36
CLCN3P51790 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 AC124945.1-201ENST00000485133 188 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.56□□□□□ -1.36
CLCN3P51790 CCDC11P1-201ENST00000503137 1162 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AC106872.4-201ENST00000510050 523 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.56□□□□□ -1.36
CLCN3P51790 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 AC020978.7-201ENST00000575953 1187 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 AC015802.2-201ENST00000589690 189 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 AC011445.2-201ENST00000599274 173 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CLCN3P51790 AL049840.6-201ENST00000604583 345 ntBASIC6.56□□□□□ -1.36
CLCN3P51790 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
CLCN3P51790 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CLCN3P51790 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLCN3P51790 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.56□□□□□ -1.36
CLCN3P51790 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 AC009779.8-201ENST00000641684 4384 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CLCN3P51790 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CLCN3P51790 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 RN7SKP151-201ENST00000410230 316 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 RNA5SP178-201ENST00000410380 128 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 TMA16P2-201ENST00000413187 601 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AL353626.3-201ENST00000413399 657 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 RPS4XP5-201ENST00000419038 768 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CLCN3P51790 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.55□□□□□ -1.36
CLCN3P51790 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 ACA64.4-201ENST00000459070 127 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 RPL23AP40-201ENST00000487630 390 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 SNORA70.20-201ENST00000516848 126 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 AC112191.2-201ENST00000522428 333 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.55□□□□□ -1.36
CLCN3P51790 AC007494.1-201ENST00000562293 760 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 TXNP4-201ENST00000575018 310 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 PRELID3BP3-201ENST00000584963 545 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.55□□□□□ -1.36
CLCN3P51790 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.55□□□□□ -1.36
CLCN3P51790 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.55□□□□□ -1.36
CLCN3P51790 RN7SL787P-201ENST00000613000 284 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.55□□□□□ -1.36
CLCN3P51790 OR11H2-202ENST00000641517 1085 ntBASIC6.55□□□□□ -1.36
CLCN3P51790 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CLCN3P51790 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLCN3P51790 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.55□□□□□ -1.36
CLCN3P51790 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.55□□□□□ -1.36
CLCN3P51790 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms