Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PART1_2.1-201ENST00000612397 250 ntBASIC7.69□□□□□ -1.18
USP11P51784 MIR6849-201ENST00000618543 69 ntBASIC7.69□□□□□ -1.18
USP11P51784 AL158163.2-201ENST00000619110 700 ntBASIC7.69□□□□□ -1.18
USP11P51784 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
USP11P51784 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.69□□□□□ -1.18
USP11P51784 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USP11P51784 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
USP11P51784 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USP11P51784 AC007998.4-201ENST00000612496 2533 ntBASIC7.69□□□□□ -1.18
USP11P51784 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USP11P51784 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.69□□□□□ -1.18
USP11P51784 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 RACGAP1P-201ENST00000550663 1879 ntBASIC7.68□□□□□ -1.18
USP11P51784 AP002833.3-201ENST00000625075 2265 ntBASIC7.68□□□□□ -1.18
USP11P51784 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
USP11P51784 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 RNA5SP65-201ENST00000363166 119 ntBASIC7.68□□□□□ -1.18
USP11P51784 RNU4-68P-201ENST00000364314 141 ntBASIC7.68□□□□□ -1.18
USP11P51784 RNU6-304P-201ENST00000364855 107 ntBASIC7.68□□□□□ -1.18
USP11P51784 RNU1-55P-201ENST00000365510 158 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC092634.1-201ENST00000366505 199 ntBASIC7.68□□□□□ -1.18
USP11P51784 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.68□□□□□ -1.18
USP11P51784 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 MIR541-201ENST00000401360 84 ntBASIC7.68□□□□□ -1.18
USP11P51784 AL353133.1-201ENST00000407695 401 ntBASIC7.68□□□□□ -1.18
USP11P51784 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 RAP1BP1-201ENST00000412709 553 ntBASIC7.68□□□□□ -1.18
USP11P51784 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.68□□□□□ -1.18
USP11P51784 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.68□□□□□ -1.18
USP11P51784 ISCA1P2-201ENST00000438679 421 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC073052.1-201ENST00000440417 714 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC022080.2-201ENST00000452932 533 ntBASIC7.68□□□□□ -1.18
USP11P51784 NDUFA12P1-201ENST00000455914 406 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC063955.1-201ENST00000462872 685 ntBASIC7.68□□□□□ -1.18
USP11P51784 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 RPL7AP23-201ENST00000482625 776 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC117395.1-201ENST00000487390 403 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 AC091951.3-201ENST00000504093 246 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC034244.1-201ENST00000507687 207 ntBASIC7.68□□□□□ -1.18
USP11P51784 SNX18P25-201ENST00000510539 758 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.68□□□□□ -1.18
USP11P51784 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.68□□□□□ -1.18
USP11P51784 AC131935.1-201ENST00000524621 333 ntBASIC7.68□□□□□ -1.18
USP11P51784 AC007115.1-201ENST00000546853 234 ntBASIC7.68□□□□□ -1.18
USP11P51784 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.68□□□□□ -1.18
USP11P51784 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC7.68□□□□□ -1.18
USP11P51784 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.68□□□□□ -1.18
USP11P51784 ZNF415P1-201ENST00000582279 1166 ntBASIC7.68□□□□□ -1.18
USP11P51784 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 AL353621.2-201ENST00000605340 133 ntBASIC7.68□□□□□ -1.18
USP11P51784 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 AL365181.4-201ENST00000609800 547 ntBASIC7.68□□□□□ -1.18
USP11P51784 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.68□□□□□ -1.18
USP11P51784 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 AC004023.1-201ENST00000561473 1744 ntBASIC7.68□□□□□ -1.18
USP11P51784 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.68□□□□□ -1.18
USP11P51784 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 AC119674.1-204ENST00000641348 1343 ntBASIC7.68□□□□□ -1.18
USP11P51784 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.68□□□□□ -1.18
USP11P51784 AL031651.1-201ENST00000615357 1438 ntBASIC7.68□□□□□ -1.18
USP11P51784 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USP11P51784 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
USP11P51784 AC022819.1-201ENST00000563495 3910 ntBASIC7.68□□□□□ -1.18
USP11P51784 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.68□□□□□ -1.18
USP11P51784 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USP11P51784 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USP11P51784 ECM1P2-201ENST00000503354 1577 ntBASIC7.67□□□□□ -1.18
USP11P51784 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USP11P51784 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.67□□□□□ -1.18
USP11P51784 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USP11P51784 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USP11P51784 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USP11P51784 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.67□□□□□ -1.18
USP11P51784 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms