Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.66□□□□□ -1.34
GPC3P51654 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
GPC3P51654 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.66□□□□□ -1.34
GPC3P51654 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
GPC3P51654 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
GPC3P51654 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 AC012254.3-201ENST00000591183 2117 ntBASIC6.65□□□□□ -1.34
GPC3P51654 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.65□□□□□ -1.34
GPC3P51654 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.65□□□□□ -1.34
GPC3P51654 AC007159.1-201ENST00000566529 4706 ntBASIC6.65□□□□□ -1.34
GPC3P51654 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 OR52B3P-201ENST00000314715 928 ntBASIC6.65□□□□□ -1.34
GPC3P51654 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
GPC3P51654 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.65□□□□□ -1.34
GPC3P51654 CDY17P-201ENST00000414121 1282 ntBASIC6.65□□□□□ -1.34
GPC3P51654 MTND6P12-201ENST00000428247 522 ntBASIC6.65□□□□□ -1.34
GPC3P51654 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
GPC3P51654 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.65□□□□□ -1.34
GPC3P51654 OR56A7P-201ENST00000524865 941 ntBASIC6.65□□□□□ -1.34
GPC3P51654 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.65□□□□□ -1.34
GPC3P51654 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 MIR4776-2-201ENST00000580204 80 ntBASIC6.65□□□□□ -1.34
GPC3P51654 AC009120.7-201ENST00000623452 780 ntBASIC6.65□□□□□ -1.34
GPC3P51654 AC018659.2-201ENST00000624690 715 ntBASIC6.65□□□□□ -1.34
GPC3P51654 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.65□□□□□ -1.34
GPC3P51654 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
GPC3P51654 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.65□□□□□ -1.35
GPC3P51654 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.65□□□□□ -1.35
GPC3P51654 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.65□□□□□ -1.35
GPC3P51654 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
GPC3P51654 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
GPC3P51654 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GPC3P51654 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GPC3P51654 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
GPC3P51654 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.65□□□□□ -1.35
GPC3P51654 AC079753.1-201ENST00000623243 3868 ntBASIC6.65□□□□□ -1.35
GPC3P51654 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GPC3P51654 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
GPC3P51654 RNA5SP284-201ENST00000384547 118 ntBASIC6.64□□□□□ -1.35
GPC3P51654 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
GPC3P51654 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.64□□□□□ -1.35
GPC3P51654 AC015977.1-201ENST00000418887 292 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AL035660.1-201ENST00000422041 222 ntBASIC6.64□□□□□ -1.35
GPC3P51654 BX323845.3-201ENST00000428215 527 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.64□□□□□ -1.35
GPC3P51654 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.64□□□□□ -1.35
GPC3P51654 AL035690.1-201ENST00000490892 383 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AC104109.1-201ENST00000498563 436 ntBASIC6.64□□□□□ -1.35
GPC3P51654 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 AC008945.1-201ENST00000505144 499 ntBASIC6.64□□□□□ -1.35
GPC3P51654 MTATP6P1-201ENST00000514057 681 ntBASIC6.64□□□□□ -1.35
GPC3P51654 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AC008429.4-201ENST00000521201 182 ntBASIC6.64□□□□□ -1.35
GPC3P51654 WBP1LP3-201ENST00000523033 208 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AP000648.1-201ENST00000529682 397 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.64□□□□□ -1.35
GPC3P51654 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.64□□□□□ -1.35
GPC3P51654 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.64□□□□□ -1.35
GPC3P51654 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 AC107993.1-201ENST00000591343 684 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.64□□□□□ -1.35
GPC3P51654 AL031601.1-201ENST00000605702 394 ntBASIC6.64□□□□□ -1.35
GPC3P51654 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 AC103703.1-201ENST00000634783 663 ntBASIC6.64□□□□□ -1.35
GPC3P51654 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.64□□□□□ -1.35
GPC3P51654 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 KARSP1-201ENST00000451871 1752 ntBASIC6.64□□□□□ -1.35
GPC3P51654 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 AC027088.4-201ENST00000611559 1947 ntBASIC6.64□□□□□ -1.35
GPC3P51654 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.64□□□□□ -1.35
GPC3P51654 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
GPC3P51654 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
GPC3P51654 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
GPC3P51654 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
GPC3P51654 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.63□□□□□ -1.35
GPC3P51654 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms