Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 OR52H2P-201ENST00000514607 902 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 CARSP2-201ENST00000520688 277 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 AC134349.2-201ENST00000535136 910 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 NF1P12-201ENST00000549593 583 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 SETP1-201ENST00000556014 845 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 AC024451.4-201ENST00000602578 752 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 FAM72A-208ENST00000607379 1139 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC116165.3-201ENST00000614524 400 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AL445649.1-201ENST00000615941 691 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AL590410.1-201ENST00000617925 333 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC006249.1-201ENST00000621223 471 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC119674.1-220ENST00000641502 1048 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 AC027279.1-201ENST00000568885 4284 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
HOXA1P49639 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA1P49639 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA1P49639 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA1P49639 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA1P49639 RNA5SP478-201ENST00000364657 115 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AC245036.1-201ENST00000391727 309 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 RBBP4P5-201ENST00000398583 1266 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AL355143.1-201ENST00000407101 841 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AL359092.1-201ENST00000417156 265 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 OR52U1P-201ENST00000439752 923 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 RPL7AP71-201ENST00000451120 739 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 EIF2S2P4-201ENST00000461070 984 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AC099340.1-201ENST00000475247 599 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AC005017.1-201ENST00000482002 490 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 AC131392.1-201ENST00000506490 633 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AC106806.2-201ENST00000509365 500 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXA1P49639 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 IGKV1D-22-201ENST00000518953 324 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AP001994.1-201ENST00000527539 826 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 SETP17-201ENST00000534163 817 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA1P49639 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXA1P49639 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA1P49639 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA1P49639 AL139022.2-201ENST00000606934 443 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AL355816.2-201ENST00000610049 647 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AC024255.1-201ENST00000614376 102 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 AC069234.4-201ENST00000621276 412 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA1P49639 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXA1P49639 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 PSMC1P4-201ENST00000515236 1327 ntBASIC5.18□□□□□ -1.58
HOXA1P49639 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA1P49639 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA1P49639 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms